Gene : Sobic.005G004900 S. bicolor v3.1.1
Defline:  (1 of 61) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Genomic Order:  50
Name:  ? Sobic.005G004900 Secondary Identifier:  ? PAC:37925582
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G004900 0.5kb upstream 0.5kb upstream 3243 true Chr05: 391030-394272 Sorghum bicolor
Sobic.005G004900 0.5kb upstream 0.5kb upstream 500 false Chr05: 391030-391529 Sorghum bicolor
Sobic.005G004900 0.5kb downstream 0.5kb downstream 3243 true Chr05: 391530-394772 Sorghum bicolor
Sobic.005G004900 0.5kb downstream 0.5kb downstream 500 false Chr05: 394273-394772 Sorghum bicolor
Sobic.005G004900 1.0kb upstream 1.0kb upstream 3743 true Chr05: 390530-394272 Sorghum bicolor
Sobic.005G004900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 390530-391529 Sorghum bicolor
Sobic.005G004900 1.0kb downstream 1.0kb downstream 3743 true Chr05: 391530-395272 Sorghum bicolor
Sobic.005G004900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 394273-395272 Sorghum bicolor
Sobic.005G004900 2.0kb upstream 2.0kb upstream 4743 true Chr05: 389530-394272 Sorghum bicolor
Sobic.005G004900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 389530-391529 Sorghum bicolor
Sobic.005G004900 2.0kb downstream 2.0kb downstream 4743 true Chr05: 391530-396272 Sorghum bicolor
Sobic.005G004900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 394273-396272 Sorghum bicolor
Sobic.005G004900 5.0kb upstream 5.0kb upstream 7743 true Chr05: 386530-394272 Sorghum bicolor
Sobic.005G004900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 386530-391529 Sorghum bicolor
Sobic.005G004900 5.0kb downstream 5.0kb downstream 7743 true Chr05: 391530-399272 Sorghum bicolor
Sobic.005G004900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 394273-399272 Sorghum bicolor
Sobic.005G004900 10.0kb upstream 10.0kb upstream 12743 true Chr05: 381530-394272 Sorghum bicolor
Sobic.005G004900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 381530-391529 Sorghum bicolor
Sobic.005G004900 10.0kb downstream 10.0kb downstream 12743 true Chr05: 391530-404272 Sorghum bicolor
Sobic.005G004900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 394273-404272 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199699 5267 Panicoideae View MSA
124585665 5269 Grass View MSA
122045837 5273 Angiosperm View MSA
121310513 5274 Embryophyte View MSA
123347976 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.164       Low
cufflinks 0.096       Low
cufflinks 0.006     Low Low
cufflinks 0.024     Low Low
cufflinks 19.648     High  
cufflinks 0.137       Low
cufflinks 26.746     High  
cufflinks 5.32        
cufflinks 1.198        
cufflinks 1.244        
cufflinks 21.662     High  
cufflinks 17.864     High  
cufflinks 21.302     High  
cufflinks 21.873     High  
cufflinks 2.69        
cufflinks 0.081       Low
cufflinks 30.722     High  
cufflinks 28.45     High  
cufflinks 1.038        
cufflinks 28.639     High  
cufflinks 0.571        
cufflinks 21.173     High  
cufflinks 23.601     High  
cufflinks 22.7     High  
cufflinks 0.044     Low Low
cufflinks 0.226       Low
cufflinks 8.838        
cufflinks 0.008     Low Low
cufflinks 26.079     High  
cufflinks 2.507        

0 Strain