Gene : Sobic.001G142000 S. bicolor v3.1.1
Defline:  (1 of 1) 3.6.1.23 - dUTP diphosphatase / dUTPase Genomic Order:  1474
Name:  ? Sobic.001G142000 Secondary Identifier:  ? PAC:37941829
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6545 Sorghum bicolor pathologic  
Sbicolor PWY-7184 Sorghum bicolor pathologic  
Sbicolor PWY-7206 Sorghum bicolor pathologic  
Sbicolor PWY-7211 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G142000 0.5kb upstream 0.5kb upstream 2082 true Chr01: 11402289-11404370 Sorghum bicolor
Sobic.001G142000 0.5kb upstream 0.5kb upstream 500 false Chr01: 11403871-11404370 Sorghum bicolor
Sobic.001G142000 0.5kb downstream 0.5kb downstream 2082 true Chr01: 11401789-11403870 Sorghum bicolor
Sobic.001G142000 0.5kb downstream 0.5kb downstream 500 false Chr01: 11401789-11402288 Sorghum bicolor
Sobic.001G142000 1.0kb upstream 1.0kb upstream 2582 true Chr01: 11402289-11404870 Sorghum bicolor
Sobic.001G142000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 11403871-11404870 Sorghum bicolor
Sobic.001G142000 1.0kb downstream 1.0kb downstream 2582 true Chr01: 11401289-11403870 Sorghum bicolor
Sobic.001G142000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 11401289-11402288 Sorghum bicolor
Sobic.001G142000 2.0kb upstream 2.0kb upstream 3582 true Chr01: 11402289-11405870 Sorghum bicolor
Sobic.001G142000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 11403871-11405870 Sorghum bicolor
Sobic.001G142000 2.0kb downstream 2.0kb downstream 3582 true Chr01: 11400289-11403870 Sorghum bicolor
Sobic.001G142000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 11400289-11402288 Sorghum bicolor
Sobic.001G142000 5.0kb upstream 5.0kb upstream 6582 true Chr01: 11402289-11408870 Sorghum bicolor
Sobic.001G142000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 11403871-11408870 Sorghum bicolor
Sobic.001G142000 5.0kb downstream 5.0kb downstream 6582 true Chr01: 11397289-11403870 Sorghum bicolor
Sobic.001G142000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 11397289-11402288 Sorghum bicolor
Sobic.001G142000 10.0kb upstream 10.0kb upstream 11582 true Chr01: 11402289-11413870 Sorghum bicolor
Sobic.001G142000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 11403871-11413870 Sorghum bicolor
Sobic.001G142000 10.0kb downstream 10.0kb downstream 11582 true Chr01: 11392289-11403870 Sorghum bicolor
Sobic.001G142000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 11392289-11402288 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040880 5273 Angiosperm View MSA
122186772 5267 Panicoideae View MSA
124569256 5269 Grass View MSA
121349726 5274 Embryophyte View MSA
123424494 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.332     High High
cufflinks 0.073       Low
cufflinks 0.188       Low
cufflinks 0.371        
cufflinks 2.172        
cufflinks 1.101        
cufflinks 4.981        
cufflinks 0.192       Low
cufflinks 1.192        
cufflinks 1.898        
cufflinks 4.236        
cufflinks 3.995        
cufflinks 0.828        
cufflinks 4.543        
cufflinks 2.211        
cufflinks 0.072     Low Low
cufflinks 4.287        
cufflinks 4.845        
cufflinks 0.095       Low
cufflinks 3.045        
cufflinks 21.5     High High
cufflinks 5.632        
cufflinks 4.789        
cufflinks 4.823        
cufflinks 0.125       Low
cufflinks 0.062       Low
cufflinks 0.702        
cufflinks 1.769        
cufflinks 0.427        
cufflinks 6.41        

0 Strain