Gene : Sobic.001G134300 S. bicolor v3.1.1
Defline:  (1 of 1) K17613 - calcineurin-binding protein cabin-1 (CABIN1) Genomic Order:  1392
Name:  ? Sobic.001G134300 Secondary Identifier:  ? PAC:37938936
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G134300 0.5kb upstream 0.5kb upstream 14523 true Chr01: 10588889-10603411 Sorghum bicolor
Sobic.001G134300 0.5kb upstream 0.5kb upstream 500 false Chr01: 10602912-10603411 Sorghum bicolor
Sobic.001G134300 0.5kb downstream 0.5kb downstream 14523 true Chr01: 10588389-10602911 Sorghum bicolor
Sobic.001G134300 0.5kb downstream 0.5kb downstream 500 false Chr01: 10588389-10588888 Sorghum bicolor
Sobic.001G134300 1.0kb upstream 1.0kb upstream 15023 true Chr01: 10588889-10603911 Sorghum bicolor
Sobic.001G134300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 10602912-10603911 Sorghum bicolor
Sobic.001G134300 1.0kb downstream 1.0kb downstream 15023 true Chr01: 10587889-10602911 Sorghum bicolor
Sobic.001G134300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10587889-10588888 Sorghum bicolor
Sobic.001G134300 2.0kb upstream 2.0kb upstream 16023 true Chr01: 10588889-10604911 Sorghum bicolor
Sobic.001G134300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 10602912-10604911 Sorghum bicolor
Sobic.001G134300 2.0kb downstream 2.0kb downstream 16023 true Chr01: 10586889-10602911 Sorghum bicolor
Sobic.001G134300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 10586889-10588888 Sorghum bicolor
Sobic.001G134300 5.0kb upstream 5.0kb upstream 19023 true Chr01: 10588889-10607911 Sorghum bicolor
Sobic.001G134300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 10602912-10607911 Sorghum bicolor
Sobic.001G134300 5.0kb downstream 5.0kb downstream 19023 true Chr01: 10583889-10602911 Sorghum bicolor
Sobic.001G134300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 10583889-10588888 Sorghum bicolor
Sobic.001G134300 10.0kb upstream 10.0kb upstream 24023 true Chr01: 10588889-10612911 Sorghum bicolor
Sobic.001G134300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 10602912-10612911 Sorghum bicolor
Sobic.001G134300 10.0kb downstream 10.0kb downstream 24023 true Chr01: 10578889-10602911 Sorghum bicolor
Sobic.001G134300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 10578889-10588888 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178465 5267 Panicoideae View MSA
124580907 5269 Grass View MSA
122042501 5273 Angiosperm View MSA
121348096 5274 Embryophyte View MSA
123424032 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.116       Low
cufflinks 1.369       Low
cufflinks 4.638        
cufflinks 4.897        
cufflinks 11.576       High
cufflinks 4.175        
cufflinks 5.026        
cufflinks 2.216       Low
cufflinks 5.995        
cufflinks 6.008        
cufflinks 6.568        
cufflinks 6.58        
cufflinks 5.303        
cufflinks 4.85        
cufflinks 7.944        
cufflinks 3.302        
cufflinks 4.253        
cufflinks 4.943        
cufflinks 4.274        
cufflinks 5.176        
cufflinks 19.783     High High
cufflinks 4.491        
cufflinks 5.172        
cufflinks 5.261        
cufflinks 3.069        
cufflinks 1.711       Low
cufflinks 7.073        
cufflinks 4.403        
cufflinks 3.689        
cufflinks 10.75       High

0 Strain