Gene : Sobic.001G134700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR19370:SF109 - FERREDOXIN C2 Genomic Order:  1396
Name:  ? Sobic.001G134700 Secondary Identifier:  ? PAC:37938604
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G134700 0.5kb upstream 0.5kb upstream 3825 true Chr01: 10636495-10640319 Sorghum bicolor
Sobic.001G134700 0.5kb upstream 0.5kb upstream 500 false Chr01: 10639820-10640319 Sorghum bicolor
Sobic.001G134700 0.5kb downstream 0.5kb downstream 3825 true Chr01: 10635995-10639819 Sorghum bicolor
Sobic.001G134700 0.5kb downstream 0.5kb downstream 500 false Chr01: 10635995-10636494 Sorghum bicolor
Sobic.001G134700 1.0kb upstream 1.0kb upstream 4325 true Chr01: 10636495-10640819 Sorghum bicolor
Sobic.001G134700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 10639820-10640819 Sorghum bicolor
Sobic.001G134700 1.0kb downstream 1.0kb downstream 4325 true Chr01: 10635495-10639819 Sorghum bicolor
Sobic.001G134700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10635495-10636494 Sorghum bicolor
Sobic.001G134700 2.0kb upstream 2.0kb upstream 5325 true Chr01: 10636495-10641819 Sorghum bicolor
Sobic.001G134700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 10639820-10641819 Sorghum bicolor
Sobic.001G134700 2.0kb downstream 2.0kb downstream 5325 true Chr01: 10634495-10639819 Sorghum bicolor
Sobic.001G134700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 10634495-10636494 Sorghum bicolor
Sobic.001G134700 5.0kb upstream 5.0kb upstream 8325 true Chr01: 10636495-10644819 Sorghum bicolor
Sobic.001G134700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 10639820-10644819 Sorghum bicolor
Sobic.001G134700 5.0kb downstream 5.0kb downstream 8325 true Chr01: 10631495-10639819 Sorghum bicolor
Sobic.001G134700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 10631495-10636494 Sorghum bicolor
Sobic.001G134700 10.0kb upstream 10.0kb upstream 13325 true Chr01: 10636495-10649819 Sorghum bicolor
Sobic.001G134700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 10639820-10649819 Sorghum bicolor
Sobic.001G134700 10.0kb downstream 10.0kb downstream 13325 true Chr01: 10626495-10639819 Sorghum bicolor
Sobic.001G134700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 10626495-10636494 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199752 5267 Panicoideae View MSA
124573779 5269 Grass View MSA
122047270 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121344610 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.82        
cufflinks 2.097        
cufflinks 3.111       High
cufflinks 2.414        
cufflinks 0.823        
cufflinks 3.24       High
cufflinks 3.523       High
cufflinks 3.98       High
cufflinks 1.096        
cufflinks 0.984        
cufflinks 0.204       Low
cufflinks 0.221       Low
cufflinks 0.739        
cufflinks 0.287       Low
cufflinks 1.374        
cufflinks 3.185       High
cufflinks 3.319       High
cufflinks 4.835       High
cufflinks 2.32        
cufflinks 2.376        
cufflinks 1.851        
cufflinks 0.307       Low
cufflinks 0.261       Low
cufflinks 0.266       Low
cufflinks 2.519        
cufflinks 2.223        
cufflinks 0.21       Low
cufflinks 1.885        
cufflinks 5.601       High
cufflinks 1.219        

0 Strain