Gene : Sobic.001G130700 S. bicolor v3.1.1
Defline:  (1 of 6) PF06136 - Domain of unknown function (DUF966) (DUF966) Genomic Order:  1356
Name:  ? Sobic.001G130700 Secondary Identifier:  ? PAC:37939615
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G130700 0.5kb upstream 0.5kb upstream 5518 true Chr01: 10272094-10277611 Sorghum bicolor
Sobic.001G130700 0.5kb upstream 0.5kb upstream 500 false Chr01: 10272094-10272593 Sorghum bicolor
Sobic.001G130700 0.5kb downstream 0.5kb downstream 5518 true Chr01: 10272594-10278111 Sorghum bicolor
Sobic.001G130700 0.5kb downstream 0.5kb downstream 500 false Chr01: 10277612-10278111 Sorghum bicolor
Sobic.001G130700 1.0kb upstream 1.0kb upstream 6018 true Chr01: 10271594-10277611 Sorghum bicolor
Sobic.001G130700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 10271594-10272593 Sorghum bicolor
Sobic.001G130700 1.0kb downstream 1.0kb downstream 6018 true Chr01: 10272594-10278611 Sorghum bicolor
Sobic.001G130700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10277612-10278611 Sorghum bicolor
Sobic.001G130700 2.0kb upstream 2.0kb upstream 7018 true Chr01: 10270594-10277611 Sorghum bicolor
Sobic.001G130700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 10270594-10272593 Sorghum bicolor
Sobic.001G130700 2.0kb downstream 2.0kb downstream 7018 true Chr01: 10272594-10279611 Sorghum bicolor
Sobic.001G130700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 10277612-10279611 Sorghum bicolor
Sobic.001G130700 5.0kb upstream 5.0kb upstream 10018 true Chr01: 10267594-10277611 Sorghum bicolor
Sobic.001G130700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 10267594-10272593 Sorghum bicolor
Sobic.001G130700 5.0kb downstream 5.0kb downstream 10018 true Chr01: 10272594-10282611 Sorghum bicolor
Sobic.001G130700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 10277612-10282611 Sorghum bicolor
Sobic.001G130700 10.0kb upstream 10.0kb upstream 15018 true Chr01: 10262594-10277611 Sorghum bicolor
Sobic.001G130700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 10262594-10272593 Sorghum bicolor
Sobic.001G130700 10.0kb downstream 10.0kb downstream 15018 true Chr01: 10272594-10287611 Sorghum bicolor
Sobic.001G130700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 10277612-10287611 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177522 5267 Panicoideae View MSA
124570434 5269 Grass View MSA
122050993 5273 Angiosperm View MSA
121349769 5274 Embryophyte View MSA
123381438 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.965        
cufflinks 0.783       Low
cufflinks 0.556       Low
cufflinks 0.776       Low
cufflinks 4.331        
cufflinks 1.743        
cufflinks 4.277        
cufflinks 9.187     High High
cufflinks 1.942        
cufflinks 4.621        
cufflinks 1.633        
cufflinks 1.429        
cufflinks 4.609        
cufflinks 2.423        
cufflinks 3.628        
cufflinks 0.835       Low
cufflinks 3.528        
cufflinks 3.426        
cufflinks 4.944       High
cufflinks 3.32        
cufflinks 4.937       High
cufflinks 1.368        
cufflinks 1.711        
cufflinks 1.77        
cufflinks 2.225        
cufflinks 2.728        
cufflinks 0.875       Low
cufflinks 0.488       Low
cufflinks 6.264       High
cufflinks 3.611        

0 Strain