Gene : Sobic.001G125000 S. bicolor v3.1.1
Defline:  (1 of 1) 3.1.3.5//3.1.3.74 - 5'-nucleotidase // Pyridoxal phosphatase / Vitamin B6-phosphate phosphatase Genomic Order:  1299
Name:  ? Sobic.001G125000 Secondary Identifier:  ? PAC:37939397
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Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5381 Sorghum bicolor pathologic  
Sbicolor PWY-5695 Sorghum bicolor pathologic  
Sbicolor PWY-6596 Sorghum bicolor pathologic  
Sbicolor PWY-6606 Sorghum bicolor pathologic  
Sbicolor PWY-6608 Sorghum bicolor pathologic  
Sbicolor PWY-7185 Sorghum bicolor pathologic  
Sbicolor PWY-7204 Sorghum bicolor pathologic  
Sbicolor SALVADEHYPOX-PWY Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G125000 0.5kb upstream 0.5kb upstream 4119 true Chr01: 9833354-9837472 Sorghum bicolor
Sobic.001G125000 0.5kb upstream 0.5kb upstream 500 false Chr01: 9836973-9837472 Sorghum bicolor
Sobic.001G125000 0.5kb downstream 0.5kb downstream 4119 true Chr01: 9832854-9836972 Sorghum bicolor
Sobic.001G125000 0.5kb downstream 0.5kb downstream 500 false Chr01: 9832854-9833353 Sorghum bicolor
Sobic.001G125000 1.0kb upstream 1.0kb upstream 4619 true Chr01: 9833354-9837972 Sorghum bicolor
Sobic.001G125000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9836973-9837972 Sorghum bicolor
Sobic.001G125000 1.0kb downstream 1.0kb downstream 4619 true Chr01: 9832354-9836972 Sorghum bicolor
Sobic.001G125000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9832354-9833353 Sorghum bicolor
Sobic.001G125000 2.0kb upstream 2.0kb upstream 5619 true Chr01: 9833354-9838972 Sorghum bicolor
Sobic.001G125000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9836973-9838972 Sorghum bicolor
Sobic.001G125000 2.0kb downstream 2.0kb downstream 5619 true Chr01: 9831354-9836972 Sorghum bicolor
Sobic.001G125000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9831354-9833353 Sorghum bicolor
Sobic.001G125000 5.0kb upstream 5.0kb upstream 8619 true Chr01: 9833354-9841972 Sorghum bicolor
Sobic.001G125000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9836973-9841972 Sorghum bicolor
Sobic.001G125000 5.0kb downstream 5.0kb downstream 8619 true Chr01: 9828354-9836972 Sorghum bicolor
Sobic.001G125000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9828354-9833353 Sorghum bicolor
Sobic.001G125000 10.0kb upstream 10.0kb upstream 13619 true Chr01: 9833354-9846972 Sorghum bicolor
Sobic.001G125000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9836973-9846972 Sorghum bicolor
Sobic.001G125000 10.0kb downstream 10.0kb downstream 13619 true Chr01: 9823354-9836972 Sorghum bicolor
Sobic.001G125000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9823354-9833353 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183548 5267 Panicoideae View MSA
124576602 5269 Grass View MSA
122048898 5273 Angiosperm View MSA
121311158 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.359       Low
cufflinks 0.966       Low
cufflinks 5.786        
cufflinks 3.33        
cufflinks 18.663     High High
cufflinks 11.884        
cufflinks 0.917       Low
cufflinks 7.169        
cufflinks 9.157        
cufflinks 5.726        
cufflinks 18.182     High  
cufflinks 8.762        
cufflinks 12.62     High  
cufflinks 10.884        
cufflinks 4.663        
cufflinks 1.684        
cufflinks 1.34        
cufflinks 0.779       Low
cufflinks 8.312        
cufflinks 2.935        
cufflinks 0.075     Low Low
cufflinks 11.287        
cufflinks 5.617        
cufflinks 5.522        
cufflinks 1.725        
cufflinks 3.037        
cufflinks 17.574     High  
cufflinks 0.869       Low
cufflinks 3.898        
cufflinks 1.788        

0 Strain