Gene : Sobic.005G010100 S. bicolor v3.1.1
Defline:  (1 of 110) K10523 - speckle-type POZ protein (SPOP) Genomic Order:  96
Name:  ? Sobic.005G010100 Secondary Identifier:  ? PAC:37925503
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G010100 0.5kb upstream 0.5kb upstream 2832 true Chr05: 871824-874655 Sorghum bicolor
Sobic.005G010100 0.5kb upstream 0.5kb upstream 500 false Chr05: 874156-874655 Sorghum bicolor
Sobic.005G010100 0.5kb downstream 0.5kb downstream 2832 true Chr05: 871324-874155 Sorghum bicolor
Sobic.005G010100 0.5kb downstream 0.5kb downstream 500 false Chr05: 871324-871823 Sorghum bicolor
Sobic.005G010100 1.0kb upstream 1.0kb upstream 3332 true Chr05: 871824-875155 Sorghum bicolor
Sobic.005G010100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 874156-875155 Sorghum bicolor
Sobic.005G010100 1.0kb downstream 1.0kb downstream 3332 true Chr05: 870824-874155 Sorghum bicolor
Sobic.005G010100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 870824-871823 Sorghum bicolor
Sobic.005G010100 2.0kb upstream 2.0kb upstream 4332 true Chr05: 871824-876155 Sorghum bicolor
Sobic.005G010100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 874156-876155 Sorghum bicolor
Sobic.005G010100 2.0kb downstream 2.0kb downstream 4332 true Chr05: 869824-874155 Sorghum bicolor
Sobic.005G010100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 869824-871823 Sorghum bicolor
Sobic.005G010100 5.0kb upstream 5.0kb upstream 7332 true Chr05: 871824-879155 Sorghum bicolor
Sobic.005G010100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 874156-879155 Sorghum bicolor
Sobic.005G010100 5.0kb downstream 5.0kb downstream 7332 true Chr05: 866824-874155 Sorghum bicolor
Sobic.005G010100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 866824-871823 Sorghum bicolor
Sobic.005G010100 10.0kb upstream 10.0kb upstream 12332 true Chr05: 871824-884155 Sorghum bicolor
Sobic.005G010100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 874156-884155 Sorghum bicolor
Sobic.005G010100 10.0kb downstream 10.0kb downstream 12332 true Chr05: 861824-874155 Sorghum bicolor
Sobic.005G010100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 861824-871823 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198304 5267 Panicoideae View MSA
124576240 5269 Grass View MSA
122047536 5273 Angiosperm View MSA
123429159 5275 Viridiplantae View MSA
121351417 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.037     Low  
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.038     Low  
cufflinks 0.008     Low Low
cufflinks 0.596        
cufflinks 0.457        
cufflinks 0.023     Low  
cufflinks 0.013     Low Low
cufflinks 3.482       High
cufflinks 4.577       High
cufflinks 0.47        
cufflinks 6.099       High
cufflinks 0.033     Low  
cufflinks 0.007     Low Low
cufflinks 0.608        
cufflinks 0.738        
cufflinks 0.005     Low Low
cufflinks 0.542        
cufflinks 0.017     Low Low
cufflinks 4.573       High
cufflinks 4.066       High
cufflinks 4.706       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.592        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.817        
cufflinks 0.016     Low Low

0 Strain