Gene : Sobic.005G012200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13902:SF49 - SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED Genomic Order:  114
Name:  ? Sobic.005G012200 Secondary Identifier:  ? PAC:37925950
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G012200 0.5kb upstream 0.5kb upstream 8710 true Chr05: 1118386-1127095 Sorghum bicolor
Sobic.005G012200 0.5kb upstream 0.5kb upstream 500 false Chr05: 1126596-1127095 Sorghum bicolor
Sobic.005G012200 0.5kb downstream 0.5kb downstream 8710 true Chr05: 1117886-1126595 Sorghum bicolor
Sobic.005G012200 0.5kb downstream 0.5kb downstream 500 false Chr05: 1117886-1118385 Sorghum bicolor
Sobic.005G012200 1.0kb upstream 1.0kb upstream 9210 true Chr05: 1118386-1127595 Sorghum bicolor
Sobic.005G012200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1126596-1127595 Sorghum bicolor
Sobic.005G012200 1.0kb downstream 1.0kb downstream 9210 true Chr05: 1117386-1126595 Sorghum bicolor
Sobic.005G012200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1117386-1118385 Sorghum bicolor
Sobic.005G012200 2.0kb upstream 2.0kb upstream 10210 true Chr05: 1118386-1128595 Sorghum bicolor
Sobic.005G012200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1126596-1128595 Sorghum bicolor
Sobic.005G012200 2.0kb downstream 2.0kb downstream 10210 true Chr05: 1116386-1126595 Sorghum bicolor
Sobic.005G012200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1116386-1118385 Sorghum bicolor
Sobic.005G012200 5.0kb upstream 5.0kb upstream 13210 true Chr05: 1118386-1131595 Sorghum bicolor
Sobic.005G012200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1126596-1131595 Sorghum bicolor
Sobic.005G012200 5.0kb downstream 5.0kb downstream 13210 true Chr05: 1113386-1126595 Sorghum bicolor
Sobic.005G012200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1113386-1118385 Sorghum bicolor
Sobic.005G012200 10.0kb upstream 10.0kb upstream 18210 true Chr05: 1118386-1136595 Sorghum bicolor
Sobic.005G012200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1126596-1136595 Sorghum bicolor
Sobic.005G012200 10.0kb downstream 10.0kb downstream 18210 true Chr05: 1108386-1126595 Sorghum bicolor
Sobic.005G012200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1108386-1118385 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188754 5267 Panicoideae View MSA
124587286 5269 Grass View MSA
122041830 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121309892 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.118       Low
cufflinks 1.339        
cufflinks 0.725        
cufflinks 0.857        
cufflinks 0.062     Low Low
cufflinks 2.471       High
cufflinks 0.685        
cufflinks 0.974        
cufflinks 1.297        
cufflinks 0.52        
cufflinks 0.941        
cufflinks 1.376        
cufflinks 0.835        
cufflinks 1.904       High
cufflinks 0.461        
cufflinks 0.794        
cufflinks 0.539        
cufflinks 0.526        
cufflinks 0.932        
cufflinks 0.572        
cufflinks 0.018     Low Low
cufflinks 0.45        
cufflinks 0.721        
cufflinks 0.825        
cufflinks 2.677       High
cufflinks 2.101       High
cufflinks 0.491        
cufflinks 0.138       Low
cufflinks 0.291        
cufflinks 0.424        

0 Strain