Gene : Sobic.001G122200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12197//PTHR12197:SF165 - SET AND MYND DOMAIN CONTAINING // HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 Genomic Order:  1270
Name:  ? Sobic.001G122200 Secondary Identifier:  ? PAC:37939579
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G122200 0.5kb upstream 0.5kb upstream 6029 true Chr01: 9620452-9626480 Sorghum bicolor
Sobic.001G122200 0.5kb upstream 0.5kb upstream 500 false Chr01: 9620452-9620951 Sorghum bicolor
Sobic.001G122200 0.5kb downstream 0.5kb downstream 6029 true Chr01: 9620952-9626980 Sorghum bicolor
Sobic.001G122200 0.5kb downstream 0.5kb downstream 500 false Chr01: 9626481-9626980 Sorghum bicolor
Sobic.001G122200 1.0kb upstream 1.0kb upstream 6529 true Chr01: 9619952-9626480 Sorghum bicolor
Sobic.001G122200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9619952-9620951 Sorghum bicolor
Sobic.001G122200 1.0kb downstream 1.0kb downstream 6529 true Chr01: 9620952-9627480 Sorghum bicolor
Sobic.001G122200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9626481-9627480 Sorghum bicolor
Sobic.001G122200 2.0kb upstream 2.0kb upstream 7529 true Chr01: 9618952-9626480 Sorghum bicolor
Sobic.001G122200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9618952-9620951 Sorghum bicolor
Sobic.001G122200 2.0kb downstream 2.0kb downstream 7529 true Chr01: 9620952-9628480 Sorghum bicolor
Sobic.001G122200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9626481-9628480 Sorghum bicolor
Sobic.001G122200 5.0kb upstream 5.0kb upstream 10529 true Chr01: 9615952-9626480 Sorghum bicolor
Sobic.001G122200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9615952-9620951 Sorghum bicolor
Sobic.001G122200 5.0kb downstream 5.0kb downstream 10529 true Chr01: 9620952-9631480 Sorghum bicolor
Sobic.001G122200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9626481-9631480 Sorghum bicolor
Sobic.001G122200 10.0kb upstream 10.0kb upstream 15529 true Chr01: 9610952-9626480 Sorghum bicolor
Sobic.001G122200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9610952-9620951 Sorghum bicolor
Sobic.001G122200 10.0kb downstream 10.0kb downstream 15529 true Chr01: 9620952-9636480 Sorghum bicolor
Sobic.001G122200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9626481-9636480 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186403 5267 Panicoideae View MSA
124569742 5269 Grass View MSA
122047928 5273 Angiosperm View MSA
121346419 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.334        
cufflinks 0.067       Low
cufflinks 0.429        
cufflinks 0.543        
cufflinks 0.713        
cufflinks 0.558        
cufflinks 0.489        
cufflinks 0.056     Low Low
cufflinks 0.686        
cufflinks 0.697        
cufflinks 0.422        
cufflinks 0.46        
cufflinks 0.54        
cufflinks 0.332        
cufflinks 0.521        
cufflinks 0.229        
cufflinks 0.488        
cufflinks 0.492        
cufflinks 0.213        
cufflinks 0.556        
cufflinks 0.991       High
cufflinks 0.567        
cufflinks 0.427        
cufflinks 0.485        
cufflinks 0.115       Low
cufflinks 0.054       Low
cufflinks 0.583        
cufflinks 0.159       Low
cufflinks 0.254        
cufflinks 0.681        

0 Strain