Gene : Sobic.005G016700 S. bicolor v3.1.1
Defline:  (1 of 29) PF04525 - LURP-one-related (LOR) Genomic Order:  155
Name:  ? Sobic.005G016700 Secondary Identifier:  ? PAC:37923419
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G016700 0.5kb upstream 0.5kb upstream 2385 true Chr05: 1486673-1489057 Sorghum bicolor
Sobic.005G016700 0.5kb upstream 0.5kb upstream 500 false Chr05: 1488558-1489057 Sorghum bicolor
Sobic.005G016700 0.5kb downstream 0.5kb downstream 2385 true Chr05: 1486173-1488557 Sorghum bicolor
Sobic.005G016700 0.5kb downstream 0.5kb downstream 500 false Chr05: 1486173-1486672 Sorghum bicolor
Sobic.005G016700 1.0kb upstream 1.0kb upstream 2885 true Chr05: 1486673-1489557 Sorghum bicolor
Sobic.005G016700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1488558-1489557 Sorghum bicolor
Sobic.005G016700 1.0kb downstream 1.0kb downstream 2885 true Chr05: 1485673-1488557 Sorghum bicolor
Sobic.005G016700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1485673-1486672 Sorghum bicolor
Sobic.005G016700 2.0kb upstream 2.0kb upstream 3885 true Chr05: 1486673-1490557 Sorghum bicolor
Sobic.005G016700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1488558-1490557 Sorghum bicolor
Sobic.005G016700 2.0kb downstream 2.0kb downstream 3885 true Chr05: 1484673-1488557 Sorghum bicolor
Sobic.005G016700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1484673-1486672 Sorghum bicolor
Sobic.005G016700 5.0kb upstream 5.0kb upstream 6885 true Chr05: 1486673-1493557 Sorghum bicolor
Sobic.005G016700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1488558-1493557 Sorghum bicolor
Sobic.005G016700 5.0kb downstream 5.0kb downstream 6885 true Chr05: 1481673-1488557 Sorghum bicolor
Sobic.005G016700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1481673-1486672 Sorghum bicolor
Sobic.005G016700 10.0kb upstream 10.0kb upstream 11885 true Chr05: 1486673-1498557 Sorghum bicolor
Sobic.005G016700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1488558-1498557 Sorghum bicolor
Sobic.005G016700 10.0kb downstream 10.0kb downstream 11885 true Chr05: 1476673-1488557 Sorghum bicolor
Sobic.005G016700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1476673-1486672 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179117 5267 Panicoideae View MSA
124583669 5269 Grass View MSA
122048664 5273 Angiosperm View MSA
121311063 5274 Embryophyte View MSA
123348415 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 1.182       High
cufflinks 1.391       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.117       High
cufflinks 0.269        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.634        
cufflinks 1.391       High
cufflinks 1.313       High
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.947       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.156        

0 Strain