Gene : Sobic.005G016600 S. bicolor v3.1.1
Defline:  (1 of 29) PF04525 - LURP-one-related (LOR) Genomic Order:  154
Name:  ? Sobic.005G016600 Secondary Identifier:  ? PAC:37923850
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G016600 0.5kb upstream 0.5kb upstream 2935 true Chr05: 1476440-1479374 Sorghum bicolor
Sobic.005G016600 0.5kb upstream 0.5kb upstream 500 false Chr05: 1478875-1479374 Sorghum bicolor
Sobic.005G016600 0.5kb downstream 0.5kb downstream 2935 true Chr05: 1475940-1478874 Sorghum bicolor
Sobic.005G016600 0.5kb downstream 0.5kb downstream 500 false Chr05: 1475940-1476439 Sorghum bicolor
Sobic.005G016600 1.0kb upstream 1.0kb upstream 3435 true Chr05: 1476440-1479874 Sorghum bicolor
Sobic.005G016600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1478875-1479874 Sorghum bicolor
Sobic.005G016600 1.0kb downstream 1.0kb downstream 3435 true Chr05: 1475440-1478874 Sorghum bicolor
Sobic.005G016600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1475440-1476439 Sorghum bicolor
Sobic.005G016600 2.0kb upstream 2.0kb upstream 4435 true Chr05: 1476440-1480874 Sorghum bicolor
Sobic.005G016600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1478875-1480874 Sorghum bicolor
Sobic.005G016600 2.0kb downstream 2.0kb downstream 4435 true Chr05: 1474440-1478874 Sorghum bicolor
Sobic.005G016600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1474440-1476439 Sorghum bicolor
Sobic.005G016600 5.0kb upstream 5.0kb upstream 7435 true Chr05: 1476440-1483874 Sorghum bicolor
Sobic.005G016600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1478875-1483874 Sorghum bicolor
Sobic.005G016600 5.0kb downstream 5.0kb downstream 7435 true Chr05: 1471440-1478874 Sorghum bicolor
Sobic.005G016600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1471440-1476439 Sorghum bicolor
Sobic.005G016600 10.0kb upstream 10.0kb upstream 12435 true Chr05: 1476440-1488874 Sorghum bicolor
Sobic.005G016600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1478875-1488874 Sorghum bicolor
Sobic.005G016600 10.0kb downstream 10.0kb downstream 12435 true Chr05: 1466440-1478874 Sorghum bicolor
Sobic.005G016600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1466440-1476439 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190556 5267 Panicoideae View MSA
124583669 5269 Grass View MSA
122048664 5273 Angiosperm View MSA
121311063 5274 Embryophyte View MSA
123348415 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 0.01     Low  
cufflinks 0.006     Low Low
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.014     Low  
cufflinks 0.015     Low  
cufflinks 0.006     Low Low
cufflinks 0.674       High
cufflinks 2.608       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.426       High
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.611        
cufflinks 1.048       High
cufflinks 1.55       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047        
cufflinks 1.465       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.02     Low  

0 Strain