Gene : Sobic.001G120000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10516:SF308 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATED Genomic Order:  1245
Name:  ? Sobic.001G120000 Secondary Identifier:  ? PAC:37940584
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G120000 0.5kb upstream 0.5kb upstream 1713 true Chr01: 9327791-9329503 Sorghum bicolor
Sobic.001G120000 0.5kb upstream 0.5kb upstream 500 false Chr01: 9327791-9328290 Sorghum bicolor
Sobic.001G120000 0.5kb downstream 0.5kb downstream 1713 true Chr01: 9328291-9330003 Sorghum bicolor
Sobic.001G120000 0.5kb downstream 0.5kb downstream 500 false Chr01: 9329504-9330003 Sorghum bicolor
Sobic.001G120000 1.0kb upstream 1.0kb upstream 2213 true Chr01: 9327291-9329503 Sorghum bicolor
Sobic.001G120000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9327291-9328290 Sorghum bicolor
Sobic.001G120000 1.0kb downstream 1.0kb downstream 2213 true Chr01: 9328291-9330503 Sorghum bicolor
Sobic.001G120000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9329504-9330503 Sorghum bicolor
Sobic.001G120000 2.0kb upstream 2.0kb upstream 3213 true Chr01: 9326291-9329503 Sorghum bicolor
Sobic.001G120000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9326291-9328290 Sorghum bicolor
Sobic.001G120000 2.0kb downstream 2.0kb downstream 3213 true Chr01: 9328291-9331503 Sorghum bicolor
Sobic.001G120000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9329504-9331503 Sorghum bicolor
Sobic.001G120000 5.0kb upstream 5.0kb upstream 6213 true Chr01: 9323291-9329503 Sorghum bicolor
Sobic.001G120000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9323291-9328290 Sorghum bicolor
Sobic.001G120000 5.0kb downstream 5.0kb downstream 6213 true Chr01: 9328291-9334503 Sorghum bicolor
Sobic.001G120000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9329504-9334503 Sorghum bicolor
Sobic.001G120000 10.0kb upstream 10.0kb upstream 11213 true Chr01: 9318291-9329503 Sorghum bicolor
Sobic.001G120000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9318291-9328290 Sorghum bicolor
Sobic.001G120000 10.0kb downstream 10.0kb downstream 11213 true Chr01: 9328291-9339503 Sorghum bicolor
Sobic.001G120000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9329504-9339503 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041293 5273 Angiosperm View MSA
122183611 5267 Panicoideae View MSA
124578287 5269 Grass View MSA
121344596 5274 Embryophyte View MSA
123424769 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.494        
cufflinks 76.821     High High
cufflinks 12.646     High  
cufflinks 2.986        
cufflinks 1.359        
cufflinks 14.834     High  
cufflinks 31.227     High High
cufflinks 74.575     High High
cufflinks 0.974        
cufflinks 0.657        
cufflinks 0.185       Low
cufflinks 0.085     Low Low
cufflinks 0.739        
cufflinks 0.189       Low
cufflinks 5.013        
cufflinks 18.137     High  
cufflinks 26.697     High High
cufflinks 37.116     High High
cufflinks 14.923     High  
cufflinks 5.599        
cufflinks 0.738        
cufflinks 0.267        
cufflinks 0.057     Low Low
cufflinks 0.151       Low
cufflinks 9.258     High  
cufflinks 78.603     High High
cufflinks 0.04     Low Low
cufflinks 1.855        
cufflinks 26.716     High High
cufflinks 3.775        

0 Strain