Gene : Sobic.001G115700 S. bicolor v3.1.1
Defline:  (1 of 1) K03934 - NADH dehydrogenase (ubiquinone) Fe-S protein 1 (NDUFS1) Genomic Order:  1200
Name:  ? Sobic.001G115700 Secondary Identifier:  ? PAC:37942930
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-3781 Sorghum bicolor pathologic  
Sbicolor PWY-4302 Sorghum bicolor pathologic  
Sbicolor PWY-5083 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G115700 0.5kb upstream 0.5kb upstream 4246 true Chr01: 9032819-9037064 Sorghum bicolor
Sobic.001G115700 0.5kb upstream 0.5kb upstream 500 false Chr01: 9032819-9033318 Sorghum bicolor
Sobic.001G115700 0.5kb downstream 0.5kb downstream 4246 true Chr01: 9033319-9037564 Sorghum bicolor
Sobic.001G115700 0.5kb downstream 0.5kb downstream 500 false Chr01: 9037065-9037564 Sorghum bicolor
Sobic.001G115700 1.0kb upstream 1.0kb upstream 4746 true Chr01: 9032319-9037064 Sorghum bicolor
Sobic.001G115700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9032319-9033318 Sorghum bicolor
Sobic.001G115700 1.0kb downstream 1.0kb downstream 4746 true Chr01: 9033319-9038064 Sorghum bicolor
Sobic.001G115700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9037065-9038064 Sorghum bicolor
Sobic.001G115700 2.0kb upstream 2.0kb upstream 5746 true Chr01: 9031319-9037064 Sorghum bicolor
Sobic.001G115700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9031319-9033318 Sorghum bicolor
Sobic.001G115700 2.0kb downstream 2.0kb downstream 5746 true Chr01: 9033319-9039064 Sorghum bicolor
Sobic.001G115700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9037065-9039064 Sorghum bicolor
Sobic.001G115700 5.0kb upstream 5.0kb upstream 8746 true Chr01: 9028319-9037064 Sorghum bicolor
Sobic.001G115700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9028319-9033318 Sorghum bicolor
Sobic.001G115700 5.0kb downstream 5.0kb downstream 8746 true Chr01: 9033319-9042064 Sorghum bicolor
Sobic.001G115700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9037065-9042064 Sorghum bicolor
Sobic.001G115700 10.0kb upstream 10.0kb upstream 13746 true Chr01: 9023319-9037064 Sorghum bicolor
Sobic.001G115700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9023319-9033318 Sorghum bicolor
Sobic.001G115700 10.0kb downstream 10.0kb downstream 13746 true Chr01: 9033319-9047064 Sorghum bicolor
Sobic.001G115700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9037065-9047064 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187508 5267 Panicoideae View MSA
124571423 5269 Grass View MSA
122044121 5273 Angiosperm View MSA
121350903 5274 Embryophyte View MSA
123424434 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.517     High  
cufflinks 18.202     High Low
cufflinks 21.48     High Low
cufflinks 25.757     High Low
cufflinks 55.34     High  
cufflinks 21.238     High Low
cufflinks 50.035     High  
cufflinks 32.643     High  
cufflinks 50.458     High  
cufflinks 62.733     High  
cufflinks 75.479     High  
cufflinks 75.971     High  
cufflinks 49.702     High  
cufflinks 89.927     High High
cufflinks 56.259     High  
cufflinks 30.794     High  
cufflinks 50.702     High  
cufflinks 51.568     High  
cufflinks 27.569     High Low
cufflinks 46.014     High  
cufflinks 55.152     High  
cufflinks 101.019     High High
cufflinks 99.671     High High
cufflinks 106.991     High High
cufflinks 18.876     High Low
cufflinks 23.065     High Low
cufflinks 46.486     High  
cufflinks 42.844     High  
cufflinks 47.994     High  
cufflinks 49.334     High  

0 Strain