Gene : Sobic.005G002700 S. bicolor v3.1.1
Defline:  (1 of 6) K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Genomic Order:  27
Name:  ? Sobic.005G002700 Secondary Identifier:  ? PAC:37925328
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G002700 0.5kb upstream 0.5kb upstream 2879 true Chr05: 207068-209946 Sorghum bicolor
Sobic.005G002700 0.5kb upstream 0.5kb upstream 500 false Chr05: 209447-209946 Sorghum bicolor
Sobic.005G002700 0.5kb downstream 0.5kb downstream 2879 true Chr05: 206568-209446 Sorghum bicolor
Sobic.005G002700 0.5kb downstream 0.5kb downstream 500 false Chr05: 206568-207067 Sorghum bicolor
Sobic.005G002700 1.0kb upstream 1.0kb upstream 3379 true Chr05: 207068-210446 Sorghum bicolor
Sobic.005G002700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 209447-210446 Sorghum bicolor
Sobic.005G002700 1.0kb downstream 1.0kb downstream 3379 true Chr05: 206068-209446 Sorghum bicolor
Sobic.005G002700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 206068-207067 Sorghum bicolor
Sobic.005G002700 2.0kb upstream 2.0kb upstream 4379 true Chr05: 207068-211446 Sorghum bicolor
Sobic.005G002700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 209447-211446 Sorghum bicolor
Sobic.005G002700 2.0kb downstream 2.0kb downstream 4379 true Chr05: 205068-209446 Sorghum bicolor
Sobic.005G002700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 205068-207067 Sorghum bicolor
Sobic.005G002700 5.0kb upstream 5.0kb upstream 7379 true Chr05: 207068-214446 Sorghum bicolor
Sobic.005G002700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 209447-214446 Sorghum bicolor
Sobic.005G002700 5.0kb downstream 5.0kb downstream 7379 true Chr05: 202068-209446 Sorghum bicolor
Sobic.005G002700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 202068-207067 Sorghum bicolor
Sobic.005G002700 10.0kb upstream 10.0kb upstream 12379 true Chr05: 207068-219446 Sorghum bicolor
Sobic.005G002700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 209447-219446 Sorghum bicolor
Sobic.005G002700 10.0kb downstream 10.0kb downstream 12379 true Chr05: 197068-209446 Sorghum bicolor
Sobic.005G002700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 197068-207067 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122019953 5273 Angiosperm View MSA
122193070 5267 Panicoideae View MSA
124581434 5269 Grass View MSA
121351532 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.312        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.008     Low Low
cufflinks 0.116        
cufflinks 0.039     Low  
cufflinks 0.015     Low  
cufflinks 0.052     Low  
cufflinks 8.978       High
cufflinks 20.329     High High
cufflinks 0.011     Low Low
cufflinks 39.245     High High
cufflinks 0.238        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.08     Low  
cufflinks 0.054     Low  
cufflinks 0.031     Low  
cufflinks 0.041     Low  
cufflinks 8.854       High
cufflinks 42.723     High High
cufflinks 37.474     High High
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.016       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.115        
cufflinks 0.243        

0 Strain