Gene : Sobic.005G002800 S. bicolor v3.1.1
Defline:  (1 of 6) K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Genomic Order:  28
Name:  ? Sobic.005G002800 Secondary Identifier:  ? PAC:37923293
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G002800 0.5kb upstream 0.5kb upstream 5472 true Chr05: 218015-223486 Sorghum bicolor
Sobic.005G002800 0.5kb upstream 0.5kb upstream 500 false Chr05: 222987-223486 Sorghum bicolor
Sobic.005G002800 0.5kb downstream 0.5kb downstream 5472 true Chr05: 217515-222986 Sorghum bicolor
Sobic.005G002800 0.5kb downstream 0.5kb downstream 500 false Chr05: 217515-218014 Sorghum bicolor
Sobic.005G002800 1.0kb upstream 1.0kb upstream 5972 true Chr05: 218015-223986 Sorghum bicolor
Sobic.005G002800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 222987-223986 Sorghum bicolor
Sobic.005G002800 1.0kb downstream 1.0kb downstream 5972 true Chr05: 217015-222986 Sorghum bicolor
Sobic.005G002800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 217015-218014 Sorghum bicolor
Sobic.005G002800 2.0kb upstream 2.0kb upstream 6972 true Chr05: 218015-224986 Sorghum bicolor
Sobic.005G002800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 222987-224986 Sorghum bicolor
Sobic.005G002800 2.0kb downstream 2.0kb downstream 6972 true Chr05: 216015-222986 Sorghum bicolor
Sobic.005G002800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 216015-218014 Sorghum bicolor
Sobic.005G002800 5.0kb upstream 5.0kb upstream 9972 true Chr05: 218015-227986 Sorghum bicolor
Sobic.005G002800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 222987-227986 Sorghum bicolor
Sobic.005G002800 5.0kb downstream 5.0kb downstream 9972 true Chr05: 213015-222986 Sorghum bicolor
Sobic.005G002800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 213015-218014 Sorghum bicolor
Sobic.005G002800 10.0kb upstream 10.0kb upstream 14972 true Chr05: 218015-232986 Sorghum bicolor
Sobic.005G002800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 222987-232986 Sorghum bicolor
Sobic.005G002800 10.0kb downstream 10.0kb downstream 14972 true Chr05: 208015-222986 Sorghum bicolor
Sobic.005G002800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 208015-218014 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122019953 5273 Angiosperm View MSA
122193070 5267 Panicoideae View MSA
124581434 5269 Grass View MSA
121351532 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.215     High  
cufflinks 0.043       Low
cufflinks 0.017     Low Low
cufflinks 0.015     Low Low
cufflinks 39.038     High High
cufflinks 0.012     Low Low
cufflinks 5.908        
cufflinks 0.975        
cufflinks 0.046     Low Low
cufflinks 0.737        
cufflinks 15.681     High  
cufflinks 10.378        
cufflinks 0.218        
cufflinks 11.206        
cufflinks 9.254        
cufflinks 0.07     Low Low
cufflinks 5.546        
cufflinks 4.973        
cufflinks 0.838        
cufflinks 3.811        
cufflinks 0.518        
cufflinks 23.615     High  
cufflinks 16.422     High  
cufflinks 18.485     High  
cufflinks 0.02     Low Low
cufflinks 0.042       Low
cufflinks 2.533        
cufflinks 0.198        
cufflinks 9.243        
cufflinks 22.148     High  

0 Strain