Gene : Sobic.001G109800 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12802//PTHR12802:SF39 - SWI/SNF COMPLEX-RELATED // SWI/SNF COMPLEX SUBUNIT SWI3D Genomic Order:  1133
Name:  ? Sobic.001G109800 Secondary Identifier:  ? PAC:37944894
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G109800 0.5kb upstream 0.5kb upstream 6348 true Chr01: 8521184-8527531 Sorghum bicolor
Sobic.001G109800 0.5kb upstream 0.5kb upstream 500 false Chr01: 8527032-8527531 Sorghum bicolor
Sobic.001G109800 0.5kb downstream 0.5kb downstream 6348 true Chr01: 8520684-8527031 Sorghum bicolor
Sobic.001G109800 0.5kb downstream 0.5kb downstream 500 false Chr01: 8520684-8521183 Sorghum bicolor
Sobic.001G109800 1.0kb upstream 1.0kb upstream 6848 true Chr01: 8521184-8528031 Sorghum bicolor
Sobic.001G109800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8527032-8528031 Sorghum bicolor
Sobic.001G109800 1.0kb downstream 1.0kb downstream 6848 true Chr01: 8520184-8527031 Sorghum bicolor
Sobic.001G109800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8520184-8521183 Sorghum bicolor
Sobic.001G109800 2.0kb upstream 2.0kb upstream 7848 true Chr01: 8521184-8529031 Sorghum bicolor
Sobic.001G109800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8527032-8529031 Sorghum bicolor
Sobic.001G109800 2.0kb downstream 2.0kb downstream 7848 true Chr01: 8519184-8527031 Sorghum bicolor
Sobic.001G109800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8519184-8521183 Sorghum bicolor
Sobic.001G109800 5.0kb upstream 5.0kb upstream 10848 true Chr01: 8521184-8532031 Sorghum bicolor
Sobic.001G109800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8527032-8532031 Sorghum bicolor
Sobic.001G109800 5.0kb downstream 5.0kb downstream 10848 true Chr01: 8516184-8527031 Sorghum bicolor
Sobic.001G109800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8516184-8521183 Sorghum bicolor
Sobic.001G109800 10.0kb upstream 10.0kb upstream 15848 true Chr01: 8521184-8537031 Sorghum bicolor
Sobic.001G109800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8527032-8537031 Sorghum bicolor
Sobic.001G109800 10.0kb downstream 10.0kb downstream 15848 true Chr01: 8511184-8527031 Sorghum bicolor
Sobic.001G109800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8511184-8521183 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181545 5267 Panicoideae View MSA
124571962 5269 Grass View MSA
122043104 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.908        
cufflinks 1.828       Low
cufflinks 3.181        
cufflinks 4.45        
cufflinks 4.266        
cufflinks 4.106        
cufflinks 2.437       Low
cufflinks 1.475       Low
cufflinks 6.809       High
cufflinks 6.428       High
cufflinks 4.662        
cufflinks 5.127        
cufflinks 4.616        
cufflinks 4.008        
cufflinks 4.486        
cufflinks 4.389        
cufflinks 2.688        
cufflinks 2.674        
cufflinks 4.279        
cufflinks 4.439        
cufflinks 4.318        
cufflinks 4.01        
cufflinks 3.99        
cufflinks 3.604        
cufflinks 3.775        
cufflinks 1.541       Low
cufflinks 3.921        
cufflinks 4.553        
cufflinks 2.126       Low
cufflinks 4.863        

0 Strain