Gene : Sobic.001G109300 S. bicolor v3.1.1
Defline:  (1 of 2) K17261 - adenylyl cyclase-associated protein (CAP1_2, SRV2) Genomic Order:  1129
Name:  ? Sobic.001G109300 Secondary Identifier:  ? PAC:37938528
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G109300 0.5kb upstream 0.5kb upstream 5991 true Chr01: 8495925-8501915 Sorghum bicolor
Sobic.001G109300 0.5kb upstream 0.5kb upstream 500 false Chr01: 8495925-8496424 Sorghum bicolor
Sobic.001G109300 0.5kb downstream 0.5kb downstream 5991 true Chr01: 8496425-8502415 Sorghum bicolor
Sobic.001G109300 0.5kb downstream 0.5kb downstream 500 false Chr01: 8501916-8502415 Sorghum bicolor
Sobic.001G109300 1.0kb upstream 1.0kb upstream 6491 true Chr01: 8495425-8501915 Sorghum bicolor
Sobic.001G109300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8495425-8496424 Sorghum bicolor
Sobic.001G109300 1.0kb downstream 1.0kb downstream 6491 true Chr01: 8496425-8502915 Sorghum bicolor
Sobic.001G109300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8501916-8502915 Sorghum bicolor
Sobic.001G109300 2.0kb upstream 2.0kb upstream 7491 true Chr01: 8494425-8501915 Sorghum bicolor
Sobic.001G109300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8494425-8496424 Sorghum bicolor
Sobic.001G109300 2.0kb downstream 2.0kb downstream 7491 true Chr01: 8496425-8503915 Sorghum bicolor
Sobic.001G109300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8501916-8503915 Sorghum bicolor
Sobic.001G109300 5.0kb upstream 5.0kb upstream 10491 true Chr01: 8491425-8501915 Sorghum bicolor
Sobic.001G109300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8491425-8496424 Sorghum bicolor
Sobic.001G109300 5.0kb downstream 5.0kb downstream 10491 true Chr01: 8496425-8506915 Sorghum bicolor
Sobic.001G109300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8501916-8506915 Sorghum bicolor
Sobic.001G109300 10.0kb upstream 10.0kb upstream 15491 true Chr01: 8486425-8501915 Sorghum bicolor
Sobic.001G109300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8486425-8496424 Sorghum bicolor
Sobic.001G109300 10.0kb downstream 10.0kb downstream 15491 true Chr01: 8496425-8511915 Sorghum bicolor
Sobic.001G109300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8501916-8511915 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196231 5267 Panicoideae View MSA
124575031 5269 Grass View MSA
122047281 5273 Angiosperm View MSA
121343811 5274 Embryophyte View MSA
123426787 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.753        
cufflinks 6.521     High Low
cufflinks 9.5        
cufflinks 11.31        
cufflinks 21.772     High  
cufflinks 8.233       Low
cufflinks 12.587     High  
cufflinks 6.99       Low
cufflinks 16.306     High  
cufflinks 17.794     High  
cufflinks 21.214     High  
cufflinks 20.101     High  
cufflinks 18.224     High  
cufflinks 25.426     High  
cufflinks 13.963     High  
cufflinks 6.973       Low
cufflinks 13.727     High  
cufflinks 14.361     High  
cufflinks 8.105       Low
cufflinks 15.302     High  
cufflinks 15.188     High  
cufflinks 41.257     High High
cufflinks 26.786     High High
cufflinks 29.473     High High
cufflinks 9.584     High  
cufflinks 5.959       Low
cufflinks 16.658     High  
cufflinks 6.556       Low
cufflinks 15.404     High  
cufflinks 12.307     High  

0 Strain