Gene : Sobic.001G107500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR24056//PTHR24056:SF187 - CELL DIVISION PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  1110
Name:  ? Sobic.001G107500 Secondary Identifier:  ? PAC:37939641
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G107500 0.5kb upstream 0.5kb upstream 3806 true Chr01: 8331250-8335055 Sorghum bicolor
Sobic.001G107500 0.5kb upstream 0.5kb upstream 500 false Chr01: 8334556-8335055 Sorghum bicolor
Sobic.001G107500 0.5kb downstream 0.5kb downstream 3806 true Chr01: 8330750-8334555 Sorghum bicolor
Sobic.001G107500 0.5kb downstream 0.5kb downstream 500 false Chr01: 8330750-8331249 Sorghum bicolor
Sobic.001G107500 1.0kb upstream 1.0kb upstream 4306 true Chr01: 8331250-8335555 Sorghum bicolor
Sobic.001G107500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8334556-8335555 Sorghum bicolor
Sobic.001G107500 1.0kb downstream 1.0kb downstream 4306 true Chr01: 8330250-8334555 Sorghum bicolor
Sobic.001G107500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8330250-8331249 Sorghum bicolor
Sobic.001G107500 2.0kb upstream 2.0kb upstream 5306 true Chr01: 8331250-8336555 Sorghum bicolor
Sobic.001G107500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8334556-8336555 Sorghum bicolor
Sobic.001G107500 2.0kb downstream 2.0kb downstream 5306 true Chr01: 8329250-8334555 Sorghum bicolor
Sobic.001G107500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8329250-8331249 Sorghum bicolor
Sobic.001G107500 5.0kb upstream 5.0kb upstream 8306 true Chr01: 8331250-8339555 Sorghum bicolor
Sobic.001G107500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8334556-8339555 Sorghum bicolor
Sobic.001G107500 5.0kb downstream 5.0kb downstream 8306 true Chr01: 8326250-8334555 Sorghum bicolor
Sobic.001G107500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8326250-8331249 Sorghum bicolor
Sobic.001G107500 10.0kb upstream 10.0kb upstream 13306 true Chr01: 8331250-8344555 Sorghum bicolor
Sobic.001G107500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8334556-8344555 Sorghum bicolor
Sobic.001G107500 10.0kb downstream 10.0kb downstream 13306 true Chr01: 8321250-8334555 Sorghum bicolor
Sobic.001G107500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8321250-8331249 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179810 5267 Panicoideae View MSA
124577566 5269 Grass View MSA
122043728 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121346780 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.978     High  
cufflinks 24.165     High Low
cufflinks 34.041     High  
cufflinks 39.888     High  
cufflinks 38.256     High  
cufflinks 31.646     High  
cufflinks 32.832     High  
cufflinks 27.317     High Low
cufflinks 54.548     High High
cufflinks 49.073     High High
cufflinks 37.027     High  
cufflinks 42.141     High  
cufflinks 44.717     High  
cufflinks 43.293     High  
cufflinks 40.319     High  
cufflinks 48.924     High High
cufflinks 34.544     High  
cufflinks 32.518     High  
cufflinks 51.768     High High
cufflinks 43.329     High  
cufflinks 47.503     High High
cufflinks 34.693     High  
cufflinks 36.71     High  
cufflinks 37.021     High  
cufflinks 30.882     High  
cufflinks 27.313     High Low
cufflinks 40.402     High  
cufflinks 65.442     High High
cufflinks 24.471     High Low
cufflinks 36.139     High  

0 Strain