Gene : Sobic.001G106300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13206 - UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEIN Genomic Order:  1096
Name:  ? Sobic.001G106300 Secondary Identifier:  ? PAC:37943083
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G106300 0.5kb upstream 0.5kb upstream 4136 true Chr01: 8188434-8192569 Sorghum bicolor
Sobic.001G106300 0.5kb upstream 0.5kb upstream 500 false Chr01: 8188434-8188933 Sorghum bicolor
Sobic.001G106300 0.5kb downstream 0.5kb downstream 4136 true Chr01: 8188934-8193069 Sorghum bicolor
Sobic.001G106300 0.5kb downstream 0.5kb downstream 500 false Chr01: 8192570-8193069 Sorghum bicolor
Sobic.001G106300 1.0kb upstream 1.0kb upstream 4636 true Chr01: 8187934-8192569 Sorghum bicolor
Sobic.001G106300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8187934-8188933 Sorghum bicolor
Sobic.001G106300 1.0kb downstream 1.0kb downstream 4636 true Chr01: 8188934-8193569 Sorghum bicolor
Sobic.001G106300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8192570-8193569 Sorghum bicolor
Sobic.001G106300 2.0kb upstream 2.0kb upstream 5636 true Chr01: 8186934-8192569 Sorghum bicolor
Sobic.001G106300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8186934-8188933 Sorghum bicolor
Sobic.001G106300 2.0kb downstream 2.0kb downstream 5636 true Chr01: 8188934-8194569 Sorghum bicolor
Sobic.001G106300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8192570-8194569 Sorghum bicolor
Sobic.001G106300 5.0kb upstream 5.0kb upstream 8636 true Chr01: 8183934-8192569 Sorghum bicolor
Sobic.001G106300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8183934-8188933 Sorghum bicolor
Sobic.001G106300 5.0kb downstream 5.0kb downstream 8636 true Chr01: 8188934-8197569 Sorghum bicolor
Sobic.001G106300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8192570-8197569 Sorghum bicolor
Sobic.001G106300 10.0kb upstream 10.0kb upstream 13636 true Chr01: 8178934-8192569 Sorghum bicolor
Sobic.001G106300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8178934-8188933 Sorghum bicolor
Sobic.001G106300 10.0kb downstream 10.0kb downstream 13636 true Chr01: 8188934-8202569 Sorghum bicolor
Sobic.001G106300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8192570-8202569 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040943 5273 Angiosperm View MSA
122186698 5267 Panicoideae View MSA
124579661 5269 Grass View MSA
121344260 5274 Embryophyte View MSA
123423854 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.721        
cufflinks 0.062       Low
cufflinks 0.227        
cufflinks 0.348        
cufflinks 1.422       High
cufflinks 0.48        
cufflinks 0.46        
cufflinks 0.222        
cufflinks 1.022       High
cufflinks 1.004       High
cufflinks 0.304        
cufflinks 0.283        
cufflinks 0.892        
cufflinks 0.238        
cufflinks 0.567        
cufflinks 0.087       Low
cufflinks 0.341        
cufflinks 0.381        
cufflinks 0.109       Low
cufflinks 0.372        
cufflinks 1.648       High
cufflinks 0.389        
cufflinks 0.197        
cufflinks 0.279        
cufflinks 0.071       Low
cufflinks 0.043       Low
cufflinks 0.41        
cufflinks 1.173       High
cufflinks 0.298        
cufflinks 0.691        

0 Strain