Gene : Sobic.001G106200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Genomic Order:  1095
Name:  ? Sobic.001G106200 Secondary Identifier:  ? PAC:37939476
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G106200 0.5kb upstream 0.5kb upstream 8190 true Chr01: 8179504-8187693 Sorghum bicolor
Sobic.001G106200 0.5kb upstream 0.5kb upstream 500 false Chr01: 8179504-8180003 Sorghum bicolor
Sobic.001G106200 0.5kb downstream 0.5kb downstream 8190 true Chr01: 8180004-8188193 Sorghum bicolor
Sobic.001G106200 0.5kb downstream 0.5kb downstream 500 false Chr01: 8187694-8188193 Sorghum bicolor
Sobic.001G106200 1.0kb upstream 1.0kb upstream 8690 true Chr01: 8179004-8187693 Sorghum bicolor
Sobic.001G106200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8179004-8180003 Sorghum bicolor
Sobic.001G106200 1.0kb downstream 1.0kb downstream 8690 true Chr01: 8180004-8188693 Sorghum bicolor
Sobic.001G106200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8187694-8188693 Sorghum bicolor
Sobic.001G106200 2.0kb upstream 2.0kb upstream 9690 true Chr01: 8178004-8187693 Sorghum bicolor
Sobic.001G106200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8178004-8180003 Sorghum bicolor
Sobic.001G106200 2.0kb downstream 2.0kb downstream 9690 true Chr01: 8180004-8189693 Sorghum bicolor
Sobic.001G106200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8187694-8189693 Sorghum bicolor
Sobic.001G106200 5.0kb upstream 5.0kb upstream 12690 true Chr01: 8175004-8187693 Sorghum bicolor
Sobic.001G106200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8175004-8180003 Sorghum bicolor
Sobic.001G106200 5.0kb downstream 5.0kb downstream 12690 true Chr01: 8180004-8192693 Sorghum bicolor
Sobic.001G106200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8187694-8192693 Sorghum bicolor
Sobic.001G106200 10.0kb upstream 10.0kb upstream 17690 true Chr01: 8170004-8187693 Sorghum bicolor
Sobic.001G106200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8170004-8180003 Sorghum bicolor
Sobic.001G106200 10.0kb downstream 10.0kb downstream 17690 true Chr01: 8180004-8197693 Sorghum bicolor
Sobic.001G106200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8187694-8197693 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188661 5267 Panicoideae View MSA
124583154 5269 Grass View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.785        
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 17.237     High High
cufflinks 0.019     Low  
cufflinks 1.329        
cufflinks 0.004     Low Low
cufflinks 19.768     High High
cufflinks 40.456     High High
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 20.28     High High
cufflinks 0.005     Low  
cufflinks 6.202       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.848        
cufflinks 1.034        
cufflinks 0.003     Low Low
cufflinks 1.107        
cufflinks 39.444     High High
cufflinks 0.015     Low  
cufflinks 0.023     Low  
cufflinks 0.004     Low Low
cufflinks 0.008     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.33        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.364        

0 Strain