Gene : Sobic.001G103400 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR23308//PTHR23308:SF34 - NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 // F16B3.3 PROTEIN Genomic Order:  1067
Name:  ? Sobic.001G103400 Secondary Identifier:  ? PAC:37940481
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G103400 0.5kb upstream 0.5kb upstream 3954 true Chr01: 7932487-7936440 Sorghum bicolor
Sobic.001G103400 0.5kb upstream 0.5kb upstream 500 false Chr01: 7932487-7932986 Sorghum bicolor
Sobic.001G103400 0.5kb downstream 0.5kb downstream 3954 true Chr01: 7932987-7936940 Sorghum bicolor
Sobic.001G103400 0.5kb downstream 0.5kb downstream 500 false Chr01: 7936441-7936940 Sorghum bicolor
Sobic.001G103400 1.0kb upstream 1.0kb upstream 4454 true Chr01: 7931987-7936440 Sorghum bicolor
Sobic.001G103400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7931987-7932986 Sorghum bicolor
Sobic.001G103400 1.0kb downstream 1.0kb downstream 4454 true Chr01: 7932987-7937440 Sorghum bicolor
Sobic.001G103400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7936441-7937440 Sorghum bicolor
Sobic.001G103400 2.0kb upstream 2.0kb upstream 5454 true Chr01: 7930987-7936440 Sorghum bicolor
Sobic.001G103400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7930987-7932986 Sorghum bicolor
Sobic.001G103400 2.0kb downstream 2.0kb downstream 5454 true Chr01: 7932987-7938440 Sorghum bicolor
Sobic.001G103400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7936441-7938440 Sorghum bicolor
Sobic.001G103400 5.0kb upstream 5.0kb upstream 8454 true Chr01: 7927987-7936440 Sorghum bicolor
Sobic.001G103400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7927987-7932986 Sorghum bicolor
Sobic.001G103400 5.0kb downstream 5.0kb downstream 8454 true Chr01: 7932987-7941440 Sorghum bicolor
Sobic.001G103400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7936441-7941440 Sorghum bicolor
Sobic.001G103400 10.0kb upstream 10.0kb upstream 13454 true Chr01: 7922987-7936440 Sorghum bicolor
Sobic.001G103400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7922987-7932986 Sorghum bicolor
Sobic.001G103400 10.0kb downstream 10.0kb downstream 13454 true Chr01: 7932987-7946440 Sorghum bicolor
Sobic.001G103400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7936441-7946440 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182433 5267 Panicoideae View MSA
124589543 5269 Grass View MSA
122045754 5273 Angiosperm View MSA
121310497 5274 Embryophyte View MSA
123427201 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.391        
cufflinks 0.066       Low
cufflinks 0.073       Low
cufflinks 0.02     Low Low
cufflinks 2.531       High
cufflinks 0.22        
cufflinks 2.545       High
cufflinks 0.083       Low
cufflinks 0.176        
cufflinks 0.37        
cufflinks 1.401        
cufflinks 1.01        
cufflinks 0.242        
cufflinks 1.037        
cufflinks 0.808        
cufflinks 0.307        
cufflinks 2.398       High
cufflinks 2.743       High
cufflinks 0.188        
cufflinks 1.563        
cufflinks 10.749       High
cufflinks 1.323        
cufflinks 1.057        
cufflinks 1.394        
cufflinks 0.112       Low
cufflinks 0.083       Low
cufflinks 0.26        
cufflinks 0.15        
cufflinks 0.138        
cufflinks 1.114        

0 Strain