Gene : Sobic.001G103300 S. bicolor v3.1.1
Defline:  (1 of 1) 3.6.3.35 - Manganese-transporting ATPase / ABC-type manganese permease complex Genomic Order:  1066
Name:  ? Sobic.001G103300 Secondary Identifier:  ? PAC:37941756
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G103300 0.5kb upstream 0.5kb upstream 21512 true Chr01: 7906767-7928278 Sorghum bicolor
Sobic.001G103300 0.5kb upstream 0.5kb upstream 500 false Chr01: 7906767-7907266 Sorghum bicolor
Sobic.001G103300 0.5kb downstream 0.5kb downstream 21512 true Chr01: 7907267-7928778 Sorghum bicolor
Sobic.001G103300 0.5kb downstream 0.5kb downstream 500 false Chr01: 7928279-7928778 Sorghum bicolor
Sobic.001G103300 1.0kb upstream 1.0kb upstream 22012 true Chr01: 7906267-7928278 Sorghum bicolor
Sobic.001G103300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7906267-7907266 Sorghum bicolor
Sobic.001G103300 1.0kb downstream 1.0kb downstream 22012 true Chr01: 7907267-7929278 Sorghum bicolor
Sobic.001G103300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7928279-7929278 Sorghum bicolor
Sobic.001G103300 2.0kb upstream 2.0kb upstream 23012 true Chr01: 7905267-7928278 Sorghum bicolor
Sobic.001G103300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7905267-7907266 Sorghum bicolor
Sobic.001G103300 2.0kb downstream 2.0kb downstream 23012 true Chr01: 7907267-7930278 Sorghum bicolor
Sobic.001G103300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7928279-7930278 Sorghum bicolor
Sobic.001G103300 5.0kb upstream 5.0kb upstream 26012 true Chr01: 7902267-7928278 Sorghum bicolor
Sobic.001G103300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7902267-7907266 Sorghum bicolor
Sobic.001G103300 5.0kb downstream 5.0kb downstream 26012 true Chr01: 7907267-7933278 Sorghum bicolor
Sobic.001G103300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7928279-7933278 Sorghum bicolor
Sobic.001G103300 10.0kb upstream 10.0kb upstream 31012 true Chr01: 7897267-7928278 Sorghum bicolor
Sobic.001G103300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7897267-7907266 Sorghum bicolor
Sobic.001G103300 10.0kb downstream 10.0kb downstream 31012 true Chr01: 7907267-7938278 Sorghum bicolor
Sobic.001G103300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7928279-7938278 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189978 5267 Panicoideae View MSA
124572570 5269 Grass View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.302        
cufflinks 0.092       Low
cufflinks 0.26        
cufflinks 0.416        
cufflinks 1.201       High
cufflinks 0.325        
cufflinks 0.486        
cufflinks 0.212       Low
cufflinks 0.398        
cufflinks 0.553        
cufflinks 0.655        
cufflinks 0.724        
cufflinks 0.588        
cufflinks 0.665        
cufflinks 0.746        
cufflinks 0.139       Low
cufflinks 0.493        
cufflinks 0.536        
cufflinks 0.19       Low
cufflinks 0.545        
cufflinks 1.469       High
cufflinks 0.759        
cufflinks 0.691        
cufflinks 0.714        
cufflinks 0.207       Low
cufflinks 0.091       Low
cufflinks 1.057       High
cufflinks 0.293        
cufflinks 0.545        
cufflinks 0.859        

0 Strain