Gene : Sobic.005G022800 S. bicolor v3.1.1
Defline:  (1 of 3) 1.14.13.39 - Nitric-oxide synthase (NADPH) / NO synthase Genomic Order:  222
Name:  ? Sobic.005G022800 Secondary Identifier:  ? PAC:37923129
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6845 Sorghum bicolor pathologic  

Genomics

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Gene Structure Displayer

Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G022800 0.5kb upstream 0.5kb upstream 5445 true Chr05: 2074250-2079694 Sorghum bicolor
Sobic.005G022800 0.5kb upstream 0.5kb upstream 500 false Chr05: 2074250-2074749 Sorghum bicolor
Sobic.005G022800 0.5kb downstream 0.5kb downstream 5445 true Chr05: 2074750-2080194 Sorghum bicolor
Sobic.005G022800 0.5kb downstream 0.5kb downstream 500 false Chr05: 2079695-2080194 Sorghum bicolor
Sobic.005G022800 1.0kb upstream 1.0kb upstream 5945 true Chr05: 2073750-2079694 Sorghum bicolor
Sobic.005G022800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2073750-2074749 Sorghum bicolor
Sobic.005G022800 1.0kb downstream 1.0kb downstream 5945 true Chr05: 2074750-2080694 Sorghum bicolor
Sobic.005G022800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2079695-2080694 Sorghum bicolor
Sobic.005G022800 2.0kb upstream 2.0kb upstream 6945 true Chr05: 2072750-2079694 Sorghum bicolor
Sobic.005G022800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2072750-2074749 Sorghum bicolor
Sobic.005G022800 2.0kb downstream 2.0kb downstream 6945 true Chr05: 2074750-2081694 Sorghum bicolor
Sobic.005G022800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2079695-2081694 Sorghum bicolor
Sobic.005G022800 5.0kb upstream 5.0kb upstream 9945 true Chr05: 2069750-2079694 Sorghum bicolor
Sobic.005G022800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2069750-2074749 Sorghum bicolor
Sobic.005G022800 5.0kb downstream 5.0kb downstream 9945 true Chr05: 2074750-2084694 Sorghum bicolor
Sobic.005G022800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2079695-2084694 Sorghum bicolor
Sobic.005G022800 10.0kb upstream 10.0kb upstream 14945 true Chr05: 2064750-2079694 Sorghum bicolor
Sobic.005G022800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2064750-2074749 Sorghum bicolor
Sobic.005G022800 10.0kb downstream 10.0kb downstream 14945 true Chr05: 2074750-2089694 Sorghum bicolor
Sobic.005G022800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2079695-2089694 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179436 5267 Panicoideae View MSA
124568372 5269 Grass View MSA
122044948 5273 Angiosperm View MSA
121347878 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.734        
cufflinks 0.183       Low
cufflinks 0.465        
cufflinks 0.671        
cufflinks 0.911        
cufflinks 1.011        
cufflinks 1.033        
cufflinks 0.834        
cufflinks 0.905        
cufflinks 0.819        
cufflinks 0.368        
cufflinks 0.429        
cufflinks 0.469        
cufflinks 0.307       Low
cufflinks 0.69        
cufflinks 0.519        
cufflinks 1.095       High
cufflinks 1.307       High
cufflinks 0.617        
cufflinks 0.847        
cufflinks 1.823       High
cufflinks 0.383        
cufflinks 0.409        
cufflinks 0.431        
cufflinks 0.351        
cufflinks 0.152       Low
cufflinks 0.386        
cufflinks 0.725        
cufflinks 2.455       High
cufflinks 0.96        

0 Strain