Gene : Sobic.001G097200 S. bicolor v3.1.1
Defline:  (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1) Genomic Order:  1002
Name:  ? Sobic.001G097200 Secondary Identifier:  ? PAC:37937415
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G097200 0.5kb upstream 0.5kb upstream 23080 true Chr01: 7467665-7490744 Sorghum bicolor
Sobic.001G097200 0.5kb upstream 0.5kb upstream 500 false Chr01: 7490245-7490744 Sorghum bicolor
Sobic.001G097200 0.5kb downstream 0.5kb downstream 23080 true Chr01: 7467165-7490244 Sorghum bicolor
Sobic.001G097200 0.5kb downstream 0.5kb downstream 500 false Chr01: 7467165-7467664 Sorghum bicolor
Sobic.001G097200 1.0kb upstream 1.0kb upstream 23580 true Chr01: 7467665-7491244 Sorghum bicolor
Sobic.001G097200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7490245-7491244 Sorghum bicolor
Sobic.001G097200 1.0kb downstream 1.0kb downstream 23580 true Chr01: 7466665-7490244 Sorghum bicolor
Sobic.001G097200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7466665-7467664 Sorghum bicolor
Sobic.001G097200 2.0kb upstream 2.0kb upstream 24580 true Chr01: 7467665-7492244 Sorghum bicolor
Sobic.001G097200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7490245-7492244 Sorghum bicolor
Sobic.001G097200 2.0kb downstream 2.0kb downstream 24580 true Chr01: 7465665-7490244 Sorghum bicolor
Sobic.001G097200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7465665-7467664 Sorghum bicolor
Sobic.001G097200 5.0kb upstream 5.0kb upstream 27580 true Chr01: 7467665-7495244 Sorghum bicolor
Sobic.001G097200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7490245-7495244 Sorghum bicolor
Sobic.001G097200 5.0kb downstream 5.0kb downstream 27580 true Chr01: 7462665-7490244 Sorghum bicolor
Sobic.001G097200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7462665-7467664 Sorghum bicolor
Sobic.001G097200 10.0kb upstream 10.0kb upstream 32580 true Chr01: 7467665-7500244 Sorghum bicolor
Sobic.001G097200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7490245-7500244 Sorghum bicolor
Sobic.001G097200 10.0kb downstream 10.0kb downstream 32580 true Chr01: 7457665-7490244 Sorghum bicolor
Sobic.001G097200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7457665-7467664 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191760 5267 Panicoideae View MSA
124574538 5269 Grass View MSA
122046807 5273 Angiosperm View MSA
121348670 5274 Embryophyte View MSA
123425696 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.289       Low
cufflinks 0.23       Low
cufflinks 0.26       Low
cufflinks 0.266       Low
cufflinks 0.928       High
cufflinks 0.366        
cufflinks 0.474        
cufflinks 0.32        
cufflinks 0.608        
cufflinks 0.588        
cufflinks 0.676        
cufflinks 0.963       High
cufflinks 0.5        
cufflinks 0.669        
cufflinks 0.66        
cufflinks 0.26       Low
cufflinks 0.396        
cufflinks 0.437        
cufflinks 0.297       Low
cufflinks 0.485        
cufflinks 1.613       High
cufflinks 0.658        
cufflinks 0.751        
cufflinks 0.753        
cufflinks 0.536        
cufflinks 0.297       Low
cufflinks 0.779        
cufflinks 0.258       Low
cufflinks 0.34        
cufflinks 0.856       High

0 Strain