Gene : Sobic.001G099800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13516//PTHR13516:SF3 - RIBONUCLEASE P SUBUNIT P25 // ALBA DNA/RNA-BINDING PROTEIN Genomic Order:  1028
Name:  ? Sobic.001G099800 Secondary Identifier:  ? PAC:37942319
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G099800 0.5kb upstream 0.5kb upstream 3777 true Chr01: 7633752-7637528 Sorghum bicolor
Sobic.001G099800 0.5kb upstream 0.5kb upstream 500 false Chr01: 7633752-7634251 Sorghum bicolor
Sobic.001G099800 0.5kb downstream 0.5kb downstream 3777 true Chr01: 7634252-7638028 Sorghum bicolor
Sobic.001G099800 0.5kb downstream 0.5kb downstream 500 false Chr01: 7637529-7638028 Sorghum bicolor
Sobic.001G099800 1.0kb upstream 1.0kb upstream 4277 true Chr01: 7633252-7637528 Sorghum bicolor
Sobic.001G099800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7633252-7634251 Sorghum bicolor
Sobic.001G099800 1.0kb downstream 1.0kb downstream 4277 true Chr01: 7634252-7638528 Sorghum bicolor
Sobic.001G099800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7637529-7638528 Sorghum bicolor
Sobic.001G099800 2.0kb upstream 2.0kb upstream 5277 true Chr01: 7632252-7637528 Sorghum bicolor
Sobic.001G099800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7632252-7634251 Sorghum bicolor
Sobic.001G099800 2.0kb downstream 2.0kb downstream 5277 true Chr01: 7634252-7639528 Sorghum bicolor
Sobic.001G099800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7637529-7639528 Sorghum bicolor
Sobic.001G099800 5.0kb upstream 5.0kb upstream 8277 true Chr01: 7629252-7637528 Sorghum bicolor
Sobic.001G099800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7629252-7634251 Sorghum bicolor
Sobic.001G099800 5.0kb downstream 5.0kb downstream 8277 true Chr01: 7634252-7642528 Sorghum bicolor
Sobic.001G099800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7637529-7642528 Sorghum bicolor
Sobic.001G099800 10.0kb upstream 10.0kb upstream 13277 true Chr01: 7624252-7637528 Sorghum bicolor
Sobic.001G099800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7624252-7634251 Sorghum bicolor
Sobic.001G099800 10.0kb downstream 10.0kb downstream 13277 true Chr01: 7634252-7647528 Sorghum bicolor
Sobic.001G099800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7637529-7647528 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187390 5267 Panicoideae View MSA
124586251 5269 Grass View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.863     High High
cufflinks 2.043       Low
cufflinks 4.636       Low
cufflinks 10.126        
cufflinks 28.418     High  
cufflinks 8.511        
cufflinks 18.959     High  
cufflinks 3.199       Low
cufflinks 20.562     High  
cufflinks 23.299     High  
cufflinks 20.344     High  
cufflinks 23.226     High  
cufflinks 14.653     High  
cufflinks 29.781     High  
cufflinks 11.525        
cufflinks 3.726       Low
cufflinks 19.892     High  
cufflinks 22.366     High  
cufflinks 6.401       Low
cufflinks 17.604     High  
cufflinks 51.751     High High
cufflinks 26.132     High  
cufflinks 27.138     High  
cufflinks 29.838     High  
cufflinks 4.244       Low
cufflinks 1.888       Low
cufflinks 17.204     High  
cufflinks 10.888     High  
cufflinks 12.619     High  
cufflinks 20.129     High  

0 Strain