Gene : Sobic.005G026200 S. bicolor v3.1.1
Defline:  (1 of 1) K11886 - proteasome component ECM29 (ECM29) Genomic Order:  253
Name:  ? Sobic.005G026200 Secondary Identifier:  ? PAC:37923109
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G026200 0.5kb upstream 0.5kb upstream 22014 true Chr05: 2341715-2363728 Sorghum bicolor
Sobic.005G026200 0.5kb upstream 0.5kb upstream 500 false Chr05: 2363229-2363728 Sorghum bicolor
Sobic.005G026200 0.5kb downstream 0.5kb downstream 22014 true Chr05: 2341215-2363228 Sorghum bicolor
Sobic.005G026200 0.5kb downstream 0.5kb downstream 500 false Chr05: 2341215-2341714 Sorghum bicolor
Sobic.005G026200 1.0kb upstream 1.0kb upstream 22514 true Chr05: 2341715-2364228 Sorghum bicolor
Sobic.005G026200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2363229-2364228 Sorghum bicolor
Sobic.005G026200 1.0kb downstream 1.0kb downstream 22514 true Chr05: 2340715-2363228 Sorghum bicolor
Sobic.005G026200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2340715-2341714 Sorghum bicolor
Sobic.005G026200 2.0kb upstream 2.0kb upstream 23514 true Chr05: 2341715-2365228 Sorghum bicolor
Sobic.005G026200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2363229-2365228 Sorghum bicolor
Sobic.005G026200 2.0kb downstream 2.0kb downstream 23514 true Chr05: 2339715-2363228 Sorghum bicolor
Sobic.005G026200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2339715-2341714 Sorghum bicolor
Sobic.005G026200 5.0kb upstream 5.0kb upstream 26514 true Chr05: 2341715-2368228 Sorghum bicolor
Sobic.005G026200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2363229-2368228 Sorghum bicolor
Sobic.005G026200 5.0kb downstream 5.0kb downstream 26514 true Chr05: 2336715-2363228 Sorghum bicolor
Sobic.005G026200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2336715-2341714 Sorghum bicolor
Sobic.005G026200 10.0kb upstream 10.0kb upstream 31514 true Chr05: 2341715-2373228 Sorghum bicolor
Sobic.005G026200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2363229-2373228 Sorghum bicolor
Sobic.005G026200 10.0kb downstream 10.0kb downstream 31514 true Chr05: 2331715-2363228 Sorghum bicolor
Sobic.005G026200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2331715-2341714 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190678 5267 Panicoideae View MSA
124578735 5269 Grass View MSA
122042594 5273 Angiosperm View MSA
121344548 5274 Embryophyte View MSA
123425052 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.147       Low
cufflinks 1.564       Low
cufflinks 4.524        
cufflinks 5.045        
cufflinks 6.328        
cufflinks 3.749        
cufflinks 4.286        
cufflinks 2.859       Low
cufflinks 8.313       High
cufflinks 6.785        
cufflinks 7.954       High
cufflinks 8.183       High
cufflinks 5.02        
cufflinks 6.414        
cufflinks 6.335        
cufflinks 2.916       Low
cufflinks 4.057        
cufflinks 4.342        
cufflinks 3.345        
cufflinks 4.596        
cufflinks 7.095        
cufflinks 6.709        
cufflinks 7.291        
cufflinks 7.464        
cufflinks 3.713        
cufflinks 2.025       Low
cufflinks 8.236       High
cufflinks 2.948        
cufflinks 3.702        
cufflinks 8.206       High

0 Strain