Gene : Sobic.001G096200 S. bicolor v3.1.1
Defline:  (1 of 3) K02946 - small subunit ribosomal protein S10 (RP-S10, MRPS10, rpsJ) Genomic Order:  989
Name:  ? Sobic.001G096200 Secondary Identifier:  ? PAC:37938961
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G096200 0.5kb upstream 0.5kb upstream 4141 true Chr01: 7396538-7400678 Sorghum bicolor
Sobic.001G096200 0.5kb upstream 0.5kb upstream 500 false Chr01: 7396538-7397037 Sorghum bicolor
Sobic.001G096200 0.5kb downstream 0.5kb downstream 4141 true Chr01: 7397038-7401178 Sorghum bicolor
Sobic.001G096200 0.5kb downstream 0.5kb downstream 500 false Chr01: 7400679-7401178 Sorghum bicolor
Sobic.001G096200 1.0kb upstream 1.0kb upstream 4641 true Chr01: 7396038-7400678 Sorghum bicolor
Sobic.001G096200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7396038-7397037 Sorghum bicolor
Sobic.001G096200 1.0kb downstream 1.0kb downstream 4641 true Chr01: 7397038-7401678 Sorghum bicolor
Sobic.001G096200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7400679-7401678 Sorghum bicolor
Sobic.001G096200 2.0kb upstream 2.0kb upstream 5641 true Chr01: 7395038-7400678 Sorghum bicolor
Sobic.001G096200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7395038-7397037 Sorghum bicolor
Sobic.001G096200 2.0kb downstream 2.0kb downstream 5641 true Chr01: 7397038-7402678 Sorghum bicolor
Sobic.001G096200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7400679-7402678 Sorghum bicolor
Sobic.001G096200 5.0kb upstream 5.0kb upstream 8641 true Chr01: 7392038-7400678 Sorghum bicolor
Sobic.001G096200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7392038-7397037 Sorghum bicolor
Sobic.001G096200 5.0kb downstream 5.0kb downstream 8641 true Chr01: 7397038-7405678 Sorghum bicolor
Sobic.001G096200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7400679-7405678 Sorghum bicolor
Sobic.001G096200 10.0kb upstream 10.0kb upstream 13641 true Chr01: 7387038-7400678 Sorghum bicolor
Sobic.001G096200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7387038-7397037 Sorghum bicolor
Sobic.001G096200 10.0kb downstream 10.0kb downstream 13641 true Chr01: 7397038-7410678 Sorghum bicolor
Sobic.001G096200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7400679-7410678 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028495 5273 Angiosperm View MSA
122199151 5267 Panicoideae View MSA
124589014 5269 Grass View MSA
121348119 5274 Embryophyte View MSA
123380732 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.804       High
cufflinks 0.067       Low
cufflinks 0.232        
cufflinks 0.187        
cufflinks 0.172        
cufflinks 0.145        
cufflinks 0.261        
cufflinks 0.172        
cufflinks 0.084       Low
cufflinks 0.062     Low Low
cufflinks 0.26        
cufflinks 0.235        
cufflinks 0.047     Low Low
cufflinks 0.231        
cufflinks 0.24        
cufflinks 0.101        
cufflinks 0.268        
cufflinks 0.327        
cufflinks 0.071     Low Low
cufflinks 0.207        
cufflinks 0.753       High
cufflinks 0.306        
cufflinks 0.268        
cufflinks 0.309        
cufflinks 0.071       Low
cufflinks 0.066       Low
cufflinks 0.222        
cufflinks 0.453       High
cufflinks 0.57       High
cufflinks 0.334        

0 Strain