Gene : Sobic.001G222600 S. bicolor v3.1.1
Defline:  (1 of 1) 4.2.1.104 - Cyanase / Cyanate lyase Genomic Order:  2315
Name:  ? Sobic.001G222600 Secondary Identifier:  ? PAC:37937837
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor CYANCAT-PWY Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G222600 0.5kb upstream 0.5kb upstream 3501 true Chr01: 21233680-21237180 Sorghum bicolor
Sobic.001G222600 0.5kb upstream 0.5kb upstream 500 false Chr01: 21236681-21237180 Sorghum bicolor
Sobic.001G222600 0.5kb downstream 0.5kb downstream 3501 true Chr01: 21233180-21236680 Sorghum bicolor
Sobic.001G222600 0.5kb downstream 0.5kb downstream 500 false Chr01: 21233180-21233679 Sorghum bicolor
Sobic.001G222600 1.0kb upstream 1.0kb upstream 4001 true Chr01: 21233680-21237680 Sorghum bicolor
Sobic.001G222600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 21236681-21237680 Sorghum bicolor
Sobic.001G222600 1.0kb downstream 1.0kb downstream 4001 true Chr01: 21232680-21236680 Sorghum bicolor
Sobic.001G222600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 21232680-21233679 Sorghum bicolor
Sobic.001G222600 2.0kb upstream 2.0kb upstream 5001 true Chr01: 21233680-21238680 Sorghum bicolor
Sobic.001G222600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 21236681-21238680 Sorghum bicolor
Sobic.001G222600 2.0kb downstream 2.0kb downstream 5001 true Chr01: 21231680-21236680 Sorghum bicolor
Sobic.001G222600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 21231680-21233679 Sorghum bicolor
Sobic.001G222600 5.0kb upstream 5.0kb upstream 8001 true Chr01: 21233680-21241680 Sorghum bicolor
Sobic.001G222600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 21236681-21241680 Sorghum bicolor
Sobic.001G222600 5.0kb downstream 5.0kb downstream 8001 true Chr01: 21228680-21236680 Sorghum bicolor
Sobic.001G222600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 21228680-21233679 Sorghum bicolor
Sobic.001G222600 10.0kb upstream 10.0kb upstream 13001 true Chr01: 21233680-21246680 Sorghum bicolor
Sobic.001G222600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 21236681-21246680 Sorghum bicolor
Sobic.001G222600 10.0kb downstream 10.0kb downstream 13001 true Chr01: 21223680-21236680 Sorghum bicolor
Sobic.001G222600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 21223680-21233679 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194353 5267 Panicoideae View MSA
124569626 5269 Grass View MSA
122044092 5273 Angiosperm View MSA
121346381 5274 Embryophyte View MSA
123424096 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.74     High  
cufflinks 13.955     High  
cufflinks 9.995     High  
cufflinks 14.516     High  
cufflinks 6.263        
cufflinks 16.55     High High
cufflinks 12.688     High  
cufflinks 19.223     High High
cufflinks 9.957        
cufflinks 11.605        
cufflinks 5.187       Low
cufflinks 4.977       Low
cufflinks 6.449        
cufflinks 7.329        
cufflinks 13.013     High  
cufflinks 18.874     High High
cufflinks 14.325     High  
cufflinks 13.742     High  
cufflinks 8.606        
cufflinks 14.248     High  
cufflinks 4.173       Low
cufflinks 8.575        
cufflinks 6.773        
cufflinks 6.206        
cufflinks 13.675     High  
cufflinks 17.964     High High
cufflinks 5.497       Low
cufflinks 66.703     High High
cufflinks 12.151     High  
cufflinks 11.727        

0 Strain