Gene : Sobic.003G409400 S. bicolor v3.1.1
Defline:  (1 of 1) K12663 - delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase (ECH1) Genomic Order:  4308
Name:  ? Sobic.003G409400 Secondary Identifier:  ? PAC:37915699
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G409400 0.5kb upstream 0.5kb upstream 2605 true Chr03: 71702711-71705315 Sorghum bicolor
Sobic.003G409400 0.5kb upstream 0.5kb upstream 500 false Chr03: 71702711-71703210 Sorghum bicolor
Sobic.003G409400 0.5kb downstream 0.5kb downstream 2605 true Chr03: 71703211-71705815 Sorghum bicolor
Sobic.003G409400 0.5kb downstream 0.5kb downstream 500 false Chr03: 71705316-71705815 Sorghum bicolor
Sobic.003G409400 1.0kb upstream 1.0kb upstream 3105 true Chr03: 71702211-71705315 Sorghum bicolor
Sobic.003G409400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 71702211-71703210 Sorghum bicolor
Sobic.003G409400 1.0kb downstream 1.0kb downstream 3105 true Chr03: 71703211-71706315 Sorghum bicolor
Sobic.003G409400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 71705316-71706315 Sorghum bicolor
Sobic.003G409400 2.0kb upstream 2.0kb upstream 4105 true Chr03: 71701211-71705315 Sorghum bicolor
Sobic.003G409400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 71701211-71703210 Sorghum bicolor
Sobic.003G409400 2.0kb downstream 2.0kb downstream 4105 true Chr03: 71703211-71707315 Sorghum bicolor
Sobic.003G409400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 71705316-71707315 Sorghum bicolor
Sobic.003G409400 5.0kb upstream 5.0kb upstream 7105 true Chr03: 71698211-71705315 Sorghum bicolor
Sobic.003G409400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 71698211-71703210 Sorghum bicolor
Sobic.003G409400 5.0kb downstream 5.0kb downstream 7105 true Chr03: 71703211-71710315 Sorghum bicolor
Sobic.003G409400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 71705316-71710315 Sorghum bicolor
Sobic.003G409400 10.0kb upstream 10.0kb upstream 12105 true Chr03: 71693211-71705315 Sorghum bicolor
Sobic.003G409400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 71693211-71703210 Sorghum bicolor
Sobic.003G409400 10.0kb downstream 10.0kb downstream 12105 true Chr03: 71703211-71715315 Sorghum bicolor
Sobic.003G409400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 71705316-71715315 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184346 5267 Panicoideae View MSA
124569441 5269 Grass View MSA
122044644 5273 Angiosperm View MSA
121346974 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.72     High High
cufflinks 3.95        
cufflinks 5.638        
cufflinks 11.325       High
cufflinks 2.838        
cufflinks 9.738       High
cufflinks 4.373        
cufflinks 3.11        
cufflinks 5.18        
cufflinks 5.774        
cufflinks 3.012        
cufflinks 4.187        
cufflinks 5.319        
cufflinks 3.948        
cufflinks 8.937       High
cufflinks 7.047        
cufflinks 5.408        
cufflinks 4.291        
cufflinks 4.945        
cufflinks 6.993        
cufflinks 1.652       Low
cufflinks 4.342        
cufflinks 2.921        
cufflinks 2.741        
cufflinks 3.552        
cufflinks 2.791        
cufflinks 10.885       High
cufflinks 35.96     High High
cufflinks 4.493        
cufflinks 10.071       High

0 Strain