Gene : Sobic.001G226100 S. bicolor v3.1.1
Defline:  (1 of 3) K02867 - large subunit ribosomal protein L11 (RP-L11, MRPL11, rplK) Genomic Order:  2347
Name:  ? Sobic.001G226100 Secondary Identifier:  ? PAC:37944916
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G226100 0.5kb upstream 0.5kb upstream 2325 true Chr01: 21621402-21623726 Sorghum bicolor
Sobic.001G226100 0.5kb upstream 0.5kb upstream 500 false Chr01: 21621402-21621901 Sorghum bicolor
Sobic.001G226100 0.5kb downstream 0.5kb downstream 2325 true Chr01: 21621902-21624226 Sorghum bicolor
Sobic.001G226100 0.5kb downstream 0.5kb downstream 500 false Chr01: 21623727-21624226 Sorghum bicolor
Sobic.001G226100 1.0kb upstream 1.0kb upstream 2825 true Chr01: 21620902-21623726 Sorghum bicolor
Sobic.001G226100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 21620902-21621901 Sorghum bicolor
Sobic.001G226100 1.0kb downstream 1.0kb downstream 2825 true Chr01: 21621902-21624726 Sorghum bicolor
Sobic.001G226100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 21623727-21624726 Sorghum bicolor
Sobic.001G226100 2.0kb upstream 2.0kb upstream 3825 true Chr01: 21619902-21623726 Sorghum bicolor
Sobic.001G226100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 21619902-21621901 Sorghum bicolor
Sobic.001G226100 2.0kb downstream 2.0kb downstream 3825 true Chr01: 21621902-21625726 Sorghum bicolor
Sobic.001G226100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 21623727-21625726 Sorghum bicolor
Sobic.001G226100 5.0kb upstream 5.0kb upstream 6825 true Chr01: 21616902-21623726 Sorghum bicolor
Sobic.001G226100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 21616902-21621901 Sorghum bicolor
Sobic.001G226100 5.0kb downstream 5.0kb downstream 6825 true Chr01: 21621902-21628726 Sorghum bicolor
Sobic.001G226100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 21623727-21628726 Sorghum bicolor
Sobic.001G226100 10.0kb upstream 10.0kb upstream 11825 true Chr01: 21611902-21623726 Sorghum bicolor
Sobic.001G226100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 21611902-21621901 Sorghum bicolor
Sobic.001G226100 10.0kb downstream 10.0kb downstream 11825 true Chr01: 21621902-21633726 Sorghum bicolor
Sobic.001G226100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 21623727-21633726 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027971 5273 Angiosperm View MSA
122177574 5267 Panicoideae View MSA
124587008 5269 Grass View MSA
121346604 5274 Embryophyte View MSA
123425186 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.779     High High
cufflinks 4.21       Low
cufflinks 6.864        
cufflinks 11.131        
cufflinks 12.957     High  
cufflinks 7.931        
cufflinks 12.032     High  
cufflinks 6.36       Low
cufflinks 7.903        
cufflinks 9.166        
cufflinks 10.873        
cufflinks 10.739        
cufflinks 7.484        
cufflinks 10.549        
cufflinks 10.172        
cufflinks 8.731        
cufflinks 12.135     High  
cufflinks 11.727     High  
cufflinks 5.59       Low
cufflinks 13.725     High  
cufflinks 22.092     High High
cufflinks 13.984     High  
cufflinks 10.929        
cufflinks 13.481     High  
cufflinks 5.101       Low
cufflinks 4.164       Low
cufflinks 7.387        
cufflinks 44.259     High High
cufflinks 8.315        
cufflinks 11.945     High  

0 Strain