Gene : Sobic.001G221800 S. bicolor v3.1.1
Defline:  (1 of 4) 3.2.1.45 - Glucosylceramidase / D-glucosyl-N-acylsphingosine glucohydrolase Genomic Order:  2302
Name:  ? Sobic.001G221800 Secondary Identifier:  ? PAC:37943511
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G221800 0.5kb upstream 0.5kb upstream 9334 true Chr01: 21001544-21010877 Sorghum bicolor
Sobic.001G221800 0.5kb upstream 0.5kb upstream 500 false Chr01: 21001544-21002043 Sorghum bicolor
Sobic.001G221800 0.5kb downstream 0.5kb downstream 9334 true Chr01: 21002044-21011377 Sorghum bicolor
Sobic.001G221800 0.5kb downstream 0.5kb downstream 500 false Chr01: 21010878-21011377 Sorghum bicolor
Sobic.001G221800 1.0kb upstream 1.0kb upstream 9834 true Chr01: 21001044-21010877 Sorghum bicolor
Sobic.001G221800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 21001044-21002043 Sorghum bicolor
Sobic.001G221800 1.0kb downstream 1.0kb downstream 9834 true Chr01: 21002044-21011877 Sorghum bicolor
Sobic.001G221800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 21010878-21011877 Sorghum bicolor
Sobic.001G221800 2.0kb upstream 2.0kb upstream 10834 true Chr01: 21000044-21010877 Sorghum bicolor
Sobic.001G221800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 21000044-21002043 Sorghum bicolor
Sobic.001G221800 2.0kb downstream 2.0kb downstream 10834 true Chr01: 21002044-21012877 Sorghum bicolor
Sobic.001G221800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 21010878-21012877 Sorghum bicolor
Sobic.001G221800 5.0kb upstream 5.0kb upstream 13834 true Chr01: 20997044-21010877 Sorghum bicolor
Sobic.001G221800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20997044-21002043 Sorghum bicolor
Sobic.001G221800 5.0kb downstream 5.0kb downstream 13834 true Chr01: 21002044-21015877 Sorghum bicolor
Sobic.001G221800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 21010878-21015877 Sorghum bicolor
Sobic.001G221800 10.0kb upstream 10.0kb upstream 18834 true Chr01: 20992044-21010877 Sorghum bicolor
Sobic.001G221800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20992044-21002043 Sorghum bicolor
Sobic.001G221800 10.0kb downstream 10.0kb downstream 18834 true Chr01: 21002044-21020877 Sorghum bicolor
Sobic.001G221800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 21010878-21020877 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182678 5267 Panicoideae View MSA
124571212 5269 Grass View MSA
122045045 5273 Angiosperm View MSA
121351037 5274 Embryophyte View MSA
123425340 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.753       Low
cufflinks 29.817     High High
cufflinks 17.96     High High
cufflinks 4.426       Low
cufflinks 6.056        
cufflinks 10.034        
cufflinks 17.134     High High
cufflinks 10.717     High  
cufflinks 7.134        
cufflinks 7.396        
cufflinks 11.525        
cufflinks 10.158        
cufflinks 14.11     High  
cufflinks 13.718     High  
cufflinks 14.816     High  
cufflinks 17.654     High High
cufflinks 13.717     High  
cufflinks 17.58     High High
cufflinks 11.755     High  
cufflinks 8.773        
cufflinks 4.83       Low
cufflinks 8.643        
cufflinks 11.29     High  
cufflinks 11.703     High  
cufflinks 23.436     High High
cufflinks 21.773     High High
cufflinks 8.157        
cufflinks 6.221        
cufflinks 11.11        
cufflinks 11.127        

0 Strain