Gene : Sobic.001G217600 S. bicolor v3.1.1
Defline:  (1 of 3) K17805 - mitochondrial import inner membrane translocase subunit TIM16 (PAM16, TIM16) Genomic Order:  2261
Name:  ? Sobic.001G217600 Secondary Identifier:  ? PAC:37940142
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G217600 0.5kb upstream 0.5kb upstream 3981 true Chr01: 20246650-20250630 Sorghum bicolor
Sobic.001G217600 0.5kb upstream 0.5kb upstream 500 false Chr01: 20250131-20250630 Sorghum bicolor
Sobic.001G217600 0.5kb downstream 0.5kb downstream 3981 true Chr01: 20246150-20250130 Sorghum bicolor
Sobic.001G217600 0.5kb downstream 0.5kb downstream 500 false Chr01: 20246150-20246649 Sorghum bicolor
Sobic.001G217600 1.0kb upstream 1.0kb upstream 4481 true Chr01: 20246650-20251130 Sorghum bicolor
Sobic.001G217600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20250131-20251130 Sorghum bicolor
Sobic.001G217600 1.0kb downstream 1.0kb downstream 4481 true Chr01: 20245650-20250130 Sorghum bicolor
Sobic.001G217600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20245650-20246649 Sorghum bicolor
Sobic.001G217600 2.0kb upstream 2.0kb upstream 5481 true Chr01: 20246650-20252130 Sorghum bicolor
Sobic.001G217600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20250131-20252130 Sorghum bicolor
Sobic.001G217600 2.0kb downstream 2.0kb downstream 5481 true Chr01: 20244650-20250130 Sorghum bicolor
Sobic.001G217600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20244650-20246649 Sorghum bicolor
Sobic.001G217600 5.0kb upstream 5.0kb upstream 8481 true Chr01: 20246650-20255130 Sorghum bicolor
Sobic.001G217600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20250131-20255130 Sorghum bicolor
Sobic.001G217600 5.0kb downstream 5.0kb downstream 8481 true Chr01: 20241650-20250130 Sorghum bicolor
Sobic.001G217600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20241650-20246649 Sorghum bicolor
Sobic.001G217600 10.0kb upstream 10.0kb upstream 13481 true Chr01: 20246650-20260130 Sorghum bicolor
Sobic.001G217600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20250131-20260130 Sorghum bicolor
Sobic.001G217600 10.0kb downstream 10.0kb downstream 13481 true Chr01: 20236650-20250130 Sorghum bicolor
Sobic.001G217600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20236650-20246649 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175064 5267 Panicoideae View MSA
124573797 5269 Grass View MSA
122051009 5273 Angiosperm View MSA
121349876 5274 Embryophyte View MSA
123426047 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.904        
cufflinks 0.528       Low
cufflinks 0.625       Low
cufflinks 1.891       High
cufflinks 0.908        
cufflinks 1.52        
cufflinks 0.923        
cufflinks 0.789        
cufflinks 2.916       High
cufflinks 2.459       High
cufflinks 0.908        
cufflinks 1.408        
cufflinks 1.526        
cufflinks 1.308        
cufflinks 1.237        
cufflinks 0.918        
cufflinks 1.063        
cufflinks 0.924        
cufflinks 1.161        
cufflinks 2.071       High
cufflinks 1.102        
cufflinks 0.907        
cufflinks 1.151        
cufflinks 1.16        
cufflinks 1.274        
cufflinks 0.814        
cufflinks 1.32        
cufflinks 1.989       High
cufflinks 0.767        
cufflinks 0.944        

0 Strain