Gene : Sobic.001G212500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR14190//PTHR14190:SF11 - SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 // SUBFAMILY NOT NAMED Genomic Order:  2214
Name:  ? Sobic.001G212500 Secondary Identifier:  ? PAC:37939446
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G212500 0.5kb upstream 0.5kb upstream 13006 true Chr01: 19628010-19641015 Sorghum bicolor
Sobic.001G212500 0.5kb upstream 0.5kb upstream 500 false Chr01: 19640516-19641015 Sorghum bicolor
Sobic.001G212500 0.5kb downstream 0.5kb downstream 13006 true Chr01: 19627510-19640515 Sorghum bicolor
Sobic.001G212500 0.5kb downstream 0.5kb downstream 500 false Chr01: 19627510-19628009 Sorghum bicolor
Sobic.001G212500 1.0kb upstream 1.0kb upstream 13506 true Chr01: 19628010-19641515 Sorghum bicolor
Sobic.001G212500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19640516-19641515 Sorghum bicolor
Sobic.001G212500 1.0kb downstream 1.0kb downstream 13506 true Chr01: 19627010-19640515 Sorghum bicolor
Sobic.001G212500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19627010-19628009 Sorghum bicolor
Sobic.001G212500 2.0kb upstream 2.0kb upstream 14506 true Chr01: 19628010-19642515 Sorghum bicolor
Sobic.001G212500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19640516-19642515 Sorghum bicolor
Sobic.001G212500 2.0kb downstream 2.0kb downstream 14506 true Chr01: 19626010-19640515 Sorghum bicolor
Sobic.001G212500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19626010-19628009 Sorghum bicolor
Sobic.001G212500 5.0kb upstream 5.0kb upstream 17506 true Chr01: 19628010-19645515 Sorghum bicolor
Sobic.001G212500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19640516-19645515 Sorghum bicolor
Sobic.001G212500 5.0kb downstream 5.0kb downstream 17506 true Chr01: 19623010-19640515 Sorghum bicolor
Sobic.001G212500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19623010-19628009 Sorghum bicolor
Sobic.001G212500 10.0kb upstream 10.0kb upstream 22506 true Chr01: 19628010-19650515 Sorghum bicolor
Sobic.001G212500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19640516-19650515 Sorghum bicolor
Sobic.001G212500 10.0kb downstream 10.0kb downstream 22506 true Chr01: 19618010-19640515 Sorghum bicolor
Sobic.001G212500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19618010-19628009 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175279 5267 Panicoideae View MSA
124569026 5269 Grass View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.018     Low  
cufflinks 0.008     Low  
cufflinks 0.047     Low High
cufflinks 0.005     Low  
cufflinks 0.013     Low  
cufflinks 0.007     Low  
cufflinks 0.028     Low  
cufflinks 0.034     Low High
cufflinks 0.008     Low  
cufflinks 0.001     Low Low
cufflinks 0.016     Low  
cufflinks 0.002     Low Low
cufflinks 0.239       High
cufflinks 0.009     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.01     Low  
cufflinks 0.011     Low  
cufflinks 0.041     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.012     Low  
cufflinks 0.012     Low  
cufflinks 0.01     Low  
cufflinks 0.046     Low High

0 Strain