Gene : Sobic.001G212300 S. bicolor v3.1.1
Defline:  (1 of 1) PF00063//PF00612 - Myosin head (motor domain) (Myosin_head) // IQ calmodulin-binding motif (IQ) Genomic Order:  2210
Name:  ? Sobic.001G212300 Secondary Identifier:  ? PAC:37944877
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G212300 0.5kb upstream 0.5kb upstream 9786 true Chr01: 19543235-19553020 Sorghum bicolor
Sobic.001G212300 0.5kb upstream 0.5kb upstream 500 false Chr01: 19552521-19553020 Sorghum bicolor
Sobic.001G212300 0.5kb downstream 0.5kb downstream 9786 true Chr01: 19542735-19552520 Sorghum bicolor
Sobic.001G212300 0.5kb downstream 0.5kb downstream 500 false Chr01: 19542735-19543234 Sorghum bicolor
Sobic.001G212300 1.0kb upstream 1.0kb upstream 10286 true Chr01: 19543235-19553520 Sorghum bicolor
Sobic.001G212300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19552521-19553520 Sorghum bicolor
Sobic.001G212300 1.0kb downstream 1.0kb downstream 10286 true Chr01: 19542235-19552520 Sorghum bicolor
Sobic.001G212300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19542235-19543234 Sorghum bicolor
Sobic.001G212300 2.0kb upstream 2.0kb upstream 11286 true Chr01: 19543235-19554520 Sorghum bicolor
Sobic.001G212300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19552521-19554520 Sorghum bicolor
Sobic.001G212300 2.0kb downstream 2.0kb downstream 11286 true Chr01: 19541235-19552520 Sorghum bicolor
Sobic.001G212300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19541235-19543234 Sorghum bicolor
Sobic.001G212300 5.0kb upstream 5.0kb upstream 14286 true Chr01: 19543235-19557520 Sorghum bicolor
Sobic.001G212300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19552521-19557520 Sorghum bicolor
Sobic.001G212300 5.0kb downstream 5.0kb downstream 14286 true Chr01: 19538235-19552520 Sorghum bicolor
Sobic.001G212300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19538235-19543234 Sorghum bicolor
Sobic.001G212300 10.0kb upstream 10.0kb upstream 19286 true Chr01: 19543235-19562520 Sorghum bicolor
Sobic.001G212300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19552521-19562520 Sorghum bicolor
Sobic.001G212300 10.0kb downstream 10.0kb downstream 19286 true Chr01: 19533235-19552520 Sorghum bicolor
Sobic.001G212300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19533235-19543234 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182197 5267 Panicoideae View MSA
124584800 5269 Grass View MSA
122049151 5273 Angiosperm View MSA
121347922 5274 Embryophyte View MSA
123426444 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.495       Low
cufflinks 52.185     High High
cufflinks 39.179     High High
cufflinks 16.334     High  
cufflinks 22.214     High  
cufflinks 26.321     High  
cufflinks 33.169     High  
cufflinks 19.784     High  
cufflinks 21.204     High  
cufflinks 19.359     High  
cufflinks 16.715     High  
cufflinks 21.563     High  
cufflinks 23.035     High  
cufflinks 18.314     High  
cufflinks 27.074     High  
cufflinks 43.654     High High
cufflinks 29.577     High  
cufflinks 32.889     High  
cufflinks 40.234     High High
cufflinks 25.374     High  
cufflinks 29.355     High  
cufflinks 17.153     High  
cufflinks 20.449     High  
cufflinks 19.937     High  
cufflinks 41.968     High High
cufflinks 39.48     High High
cufflinks 17.222     High  
cufflinks 7.819       Low
cufflinks 15.76     High  
cufflinks 21.507     High  

0 Strain