Gene : Sobic.001G213400 S. bicolor v3.1.1
Defline:  (1 of 1) K06950 - uncharacterized protein (K06950) Genomic Order:  2224
Name:  ? Sobic.001G213400 Secondary Identifier:  ? PAC:37938859
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G213400 0.5kb upstream 0.5kb upstream 3944 true Chr01: 19698442-19702385 Sorghum bicolor
Sobic.001G213400 0.5kb upstream 0.5kb upstream 500 false Chr01: 19701886-19702385 Sorghum bicolor
Sobic.001G213400 0.5kb downstream 0.5kb downstream 3944 true Chr01: 19697942-19701885 Sorghum bicolor
Sobic.001G213400 0.5kb downstream 0.5kb downstream 500 false Chr01: 19697942-19698441 Sorghum bicolor
Sobic.001G213400 1.0kb upstream 1.0kb upstream 4444 true Chr01: 19698442-19702885 Sorghum bicolor
Sobic.001G213400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19701886-19702885 Sorghum bicolor
Sobic.001G213400 1.0kb downstream 1.0kb downstream 4444 true Chr01: 19697442-19701885 Sorghum bicolor
Sobic.001G213400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19697442-19698441 Sorghum bicolor
Sobic.001G213400 2.0kb upstream 2.0kb upstream 5444 true Chr01: 19698442-19703885 Sorghum bicolor
Sobic.001G213400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19701886-19703885 Sorghum bicolor
Sobic.001G213400 2.0kb downstream 2.0kb downstream 5444 true Chr01: 19696442-19701885 Sorghum bicolor
Sobic.001G213400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19696442-19698441 Sorghum bicolor
Sobic.001G213400 5.0kb upstream 5.0kb upstream 8444 true Chr01: 19698442-19706885 Sorghum bicolor
Sobic.001G213400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19701886-19706885 Sorghum bicolor
Sobic.001G213400 5.0kb downstream 5.0kb downstream 8444 true Chr01: 19693442-19701885 Sorghum bicolor
Sobic.001G213400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19693442-19698441 Sorghum bicolor
Sobic.001G213400 10.0kb upstream 10.0kb upstream 13444 true Chr01: 19698442-19711885 Sorghum bicolor
Sobic.001G213400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19701886-19711885 Sorghum bicolor
Sobic.001G213400 10.0kb downstream 10.0kb downstream 13444 true Chr01: 19688442-19701885 Sorghum bicolor
Sobic.001G213400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19688442-19698441 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186040 5267 Panicoideae View MSA
124570531 5269 Grass View MSA
122047991 5273 Angiosperm View MSA
121346124 5274 Embryophyte View MSA
123423985 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.529     High  
cufflinks 7.618     High  
cufflinks 26.548     High High
cufflinks 31.824     High High
cufflinks 8.558        
cufflinks 24.903     High High
cufflinks 11.657     High  
cufflinks 4.042       Low
cufflinks 19.028     High High
cufflinks 22.209     High High
cufflinks 7.043        
cufflinks 9.178        
cufflinks 15.708     High  
cufflinks 10.903        
cufflinks 19.054     High High
cufflinks 22.088     High High
cufflinks 11.891     High  
cufflinks 12.195     High  
cufflinks 12.853     High  
cufflinks 12.698     High  
cufflinks 13.248        
cufflinks 7.535        
cufflinks 10.523        
cufflinks 9.27        
cufflinks 7.855        
cufflinks 5.403       Low
cufflinks 13.721     High  
cufflinks 10.168     High  
cufflinks 5.41       Low
cufflinks 16.7     High  

0 Strain