Gene : Sobic.001G207800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22911 - ACYL-MALONYL CONDENSING ENZYME-RELATED Genomic Order:  2162
Name:  ? Sobic.001G207800 Secondary Identifier:  ? PAC:37942154
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G207800 0.5kb upstream 0.5kb upstream 4045 true Chr01: 19036746-19040790 Sorghum bicolor
Sobic.001G207800 0.5kb upstream 0.5kb upstream 500 false Chr01: 19040291-19040790 Sorghum bicolor
Sobic.001G207800 0.5kb downstream 0.5kb downstream 4045 true Chr01: 19036246-19040290 Sorghum bicolor
Sobic.001G207800 0.5kb downstream 0.5kb downstream 500 false Chr01: 19036246-19036745 Sorghum bicolor
Sobic.001G207800 1.0kb upstream 1.0kb upstream 4545 true Chr01: 19036746-19041290 Sorghum bicolor
Sobic.001G207800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19040291-19041290 Sorghum bicolor
Sobic.001G207800 1.0kb downstream 1.0kb downstream 4545 true Chr01: 19035746-19040290 Sorghum bicolor
Sobic.001G207800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19035746-19036745 Sorghum bicolor
Sobic.001G207800 2.0kb upstream 2.0kb upstream 5545 true Chr01: 19036746-19042290 Sorghum bicolor
Sobic.001G207800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19040291-19042290 Sorghum bicolor
Sobic.001G207800 2.0kb downstream 2.0kb downstream 5545 true Chr01: 19034746-19040290 Sorghum bicolor
Sobic.001G207800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19034746-19036745 Sorghum bicolor
Sobic.001G207800 5.0kb upstream 5.0kb upstream 8545 true Chr01: 19036746-19045290 Sorghum bicolor
Sobic.001G207800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19040291-19045290 Sorghum bicolor
Sobic.001G207800 5.0kb downstream 5.0kb downstream 8545 true Chr01: 19031746-19040290 Sorghum bicolor
Sobic.001G207800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19031746-19036745 Sorghum bicolor
Sobic.001G207800 10.0kb upstream 10.0kb upstream 13545 true Chr01: 19036746-19050290 Sorghum bicolor
Sobic.001G207800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19040291-19050290 Sorghum bicolor
Sobic.001G207800 10.0kb downstream 10.0kb downstream 13545 true Chr01: 19026746-19040290 Sorghum bicolor
Sobic.001G207800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19026746-19036745 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040883 5273 Angiosperm View MSA
122183135 5267 Panicoideae View MSA
124580980 5269 Grass View MSA
121351564 5274 Embryophyte View MSA
123424417 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.309       Low
cufflinks 53.314     High High
cufflinks 26.556     High High
cufflinks 15.935     High  
cufflinks 3.648        
cufflinks 24.308     High High
cufflinks 18.941     High  
cufflinks 25.839     High High
cufflinks 4.605        
cufflinks 4.444        
cufflinks 0.564       Low
cufflinks 1.394        
cufflinks 6.178        
cufflinks 0.764       Low
cufflinks 9.769        
cufflinks 33.882     High High
cufflinks 18.658     High  
cufflinks 19.887     High  
cufflinks 25.254     High High
cufflinks 19.96     High  
cufflinks 2.975        
cufflinks 0.596       Low
cufflinks 0.981       Low
cufflinks 0.85       Low
cufflinks 36.817     High High
cufflinks 42.183     High High
cufflinks 1.224        
cufflinks 0.108       Low
cufflinks 17.801     High  
cufflinks 7.302        

0 Strain