Gene : Sobic.003G420201 S. bicolor v3.1.1
Defline:  Predicted protein Genomic Order:  4420
Name:  ? Sobic.003G420201 Secondary Identifier:  ? PAC:37913688
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G420201 0.5kb upstream 0.5kb upstream 1407 true Chr03: 72533344-72534750 Sorghum bicolor
Sobic.003G420201 0.5kb upstream 0.5kb upstream 500 false Chr03: 72534251-72534750 Sorghum bicolor
Sobic.003G420201 0.5kb downstream 0.5kb downstream 1407 true Chr03: 72532844-72534250 Sorghum bicolor
Sobic.003G420201 0.5kb downstream 0.5kb downstream 500 false Chr03: 72532844-72533343 Sorghum bicolor
Sobic.003G420201 1.0kb upstream 1.0kb upstream 1907 true Chr03: 72533344-72535250 Sorghum bicolor
Sobic.003G420201 1.0kb upstream 1.0kb upstream 1000 false Chr03: 72534251-72535250 Sorghum bicolor
Sobic.003G420201 1.0kb downstream 1.0kb downstream 1907 true Chr03: 72532344-72534250 Sorghum bicolor
Sobic.003G420201 1.0kb downstream 1.0kb downstream 1000 false Chr03: 72532344-72533343 Sorghum bicolor
Sobic.003G420201 2.0kb upstream 2.0kb upstream 2907 true Chr03: 72533344-72536250 Sorghum bicolor
Sobic.003G420201 2.0kb upstream 2.0kb upstream 2000 false Chr03: 72534251-72536250 Sorghum bicolor
Sobic.003G420201 2.0kb downstream 2.0kb downstream 2907 true Chr03: 72531344-72534250 Sorghum bicolor
Sobic.003G420201 2.0kb downstream 2.0kb downstream 2000 false Chr03: 72531344-72533343 Sorghum bicolor
Sobic.003G420201 5.0kb upstream 5.0kb upstream 5907 true Chr03: 72533344-72539250 Sorghum bicolor
Sobic.003G420201 5.0kb upstream 5.0kb upstream 5000 false Chr03: 72534251-72539250 Sorghum bicolor
Sobic.003G420201 5.0kb downstream 5.0kb downstream 5907 true Chr03: 72528344-72534250 Sorghum bicolor
Sobic.003G420201 5.0kb downstream 5.0kb downstream 5000 false Chr03: 72528344-72533343 Sorghum bicolor
Sobic.003G420201 10.0kb upstream 10.0kb upstream 10907 true Chr03: 72533344-72544250 Sorghum bicolor
Sobic.003G420201 10.0kb upstream 10.0kb upstream 10000 false Chr03: 72534251-72544250 Sorghum bicolor
Sobic.003G420201 10.0kb downstream 10.0kb downstream 10907 true Chr03: 72523344-72534250 Sorghum bicolor
Sobic.003G420201 10.0kb downstream 10.0kb downstream 10000 false Chr03: 72523344-72533343 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041158 5273 Angiosperm View MSA
122177723 5267 Panicoideae View MSA
124579828 5269 Grass View MSA
121309806 5274 Embryophyte View MSA
123347460 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.198        
cufflinks 2.275        
cufflinks 0.574        
cufflinks 0.958        
cufflinks 0.067     Low Low
cufflinks 7.289       High
cufflinks 4.396       High
cufflinks 3.967       High
cufflinks 0.193        
cufflinks 0.144       Low
cufflinks 0.192        
cufflinks 0.333        
cufflinks 0.836        
cufflinks 0.208        
cufflinks 4.747       High
cufflinks 1.678        
cufflinks 7.153       High
cufflinks 4.829       High
cufflinks 3.562        
cufflinks 4.783       High
cufflinks 0.193        
cufflinks 0.126       Low
cufflinks 0.126       Low
cufflinks 0.166       Low
cufflinks 1.627        
cufflinks 2.14        
cufflinks 0.224        
cufflinks 1.784        
cufflinks 5.084       High
cufflinks 5.063       High

0 Strain