Gene : Sobic.001G209300 S. bicolor v3.1.1
Defline:  (1 of 5) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  2179
Name:  ? Sobic.001G209300 Secondary Identifier:  ? PAC:37939960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G209300 0.5kb upstream 0.5kb upstream 1616 true Chr01: 19151229-19152844 Sorghum bicolor
Sobic.001G209300 0.5kb upstream 0.5kb upstream 500 false Chr01: 19152345-19152844 Sorghum bicolor
Sobic.001G209300 0.5kb downstream 0.5kb downstream 1616 true Chr01: 19150729-19152344 Sorghum bicolor
Sobic.001G209300 0.5kb downstream 0.5kb downstream 500 false Chr01: 19150729-19151228 Sorghum bicolor
Sobic.001G209300 1.0kb upstream 1.0kb upstream 2116 true Chr01: 19151229-19153344 Sorghum bicolor
Sobic.001G209300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19152345-19153344 Sorghum bicolor
Sobic.001G209300 1.0kb downstream 1.0kb downstream 2116 true Chr01: 19150229-19152344 Sorghum bicolor
Sobic.001G209300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19150229-19151228 Sorghum bicolor
Sobic.001G209300 2.0kb upstream 2.0kb upstream 3116 true Chr01: 19151229-19154344 Sorghum bicolor
Sobic.001G209300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19152345-19154344 Sorghum bicolor
Sobic.001G209300 2.0kb downstream 2.0kb downstream 3116 true Chr01: 19149229-19152344 Sorghum bicolor
Sobic.001G209300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19149229-19151228 Sorghum bicolor
Sobic.001G209300 5.0kb upstream 5.0kb upstream 6116 true Chr01: 19151229-19157344 Sorghum bicolor
Sobic.001G209300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19152345-19157344 Sorghum bicolor
Sobic.001G209300 5.0kb downstream 5.0kb downstream 6116 true Chr01: 19146229-19152344 Sorghum bicolor
Sobic.001G209300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19146229-19151228 Sorghum bicolor
Sobic.001G209300 10.0kb upstream 10.0kb upstream 11116 true Chr01: 19151229-19162344 Sorghum bicolor
Sobic.001G209300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19152345-19162344 Sorghum bicolor
Sobic.001G209300 10.0kb downstream 10.0kb downstream 11116 true Chr01: 19141229-19152344 Sorghum bicolor
Sobic.001G209300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19141229-19151228 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192671 5267 Panicoideae View MSA
124585877 5269 Grass View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.351     High High
cufflinks 0.068       Low
cufflinks 0.12       Low
cufflinks 0.212        
cufflinks 0.012     Low Low
cufflinks 0.185        
cufflinks 2.092        
cufflinks 0.349        
cufflinks 0.062     Low Low
cufflinks 0.124        
cufflinks 4.922        
cufflinks 4.825        
cufflinks 0.313        
cufflinks 6.035       High
cufflinks 1.293        
cufflinks 0.131        
cufflinks 2.306        
cufflinks 1.158        
cufflinks 0.256        
cufflinks 1.451        
cufflinks 0.022     Low Low
cufflinks 2.993        
cufflinks 7.078       High
cufflinks 5.957       High
cufflinks 0.556        
cufflinks 0.083       Low
cufflinks 12.384     High High
cufflinks 0.613        
cufflinks 0.131        
cufflinks 1.009        

0 Strain