Gene : Sobic.001G204000 S. bicolor v3.1.1
Defline:  similar to Expressed protein Genomic Order:  2122
Name:  ? Sobic.001G204000 Secondary Identifier:  ? PAC:37940352
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G204000 0.5kb upstream 0.5kb upstream 3574 true Chr01: 18595766-18599339 Sorghum bicolor
Sobic.001G204000 0.5kb upstream 0.5kb upstream 500 false Chr01: 18598840-18599339 Sorghum bicolor
Sobic.001G204000 0.5kb downstream 0.5kb downstream 3574 true Chr01: 18595266-18598839 Sorghum bicolor
Sobic.001G204000 0.5kb downstream 0.5kb downstream 500 false Chr01: 18595266-18595765 Sorghum bicolor
Sobic.001G204000 1.0kb upstream 1.0kb upstream 4074 true Chr01: 18595766-18599839 Sorghum bicolor
Sobic.001G204000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18598840-18599839 Sorghum bicolor
Sobic.001G204000 1.0kb downstream 1.0kb downstream 4074 true Chr01: 18594766-18598839 Sorghum bicolor
Sobic.001G204000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18594766-18595765 Sorghum bicolor
Sobic.001G204000 2.0kb upstream 2.0kb upstream 5074 true Chr01: 18595766-18600839 Sorghum bicolor
Sobic.001G204000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18598840-18600839 Sorghum bicolor
Sobic.001G204000 2.0kb downstream 2.0kb downstream 5074 true Chr01: 18593766-18598839 Sorghum bicolor
Sobic.001G204000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18593766-18595765 Sorghum bicolor
Sobic.001G204000 5.0kb upstream 5.0kb upstream 8074 true Chr01: 18595766-18603839 Sorghum bicolor
Sobic.001G204000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18598840-18603839 Sorghum bicolor
Sobic.001G204000 5.0kb downstream 5.0kb downstream 8074 true Chr01: 18590766-18598839 Sorghum bicolor
Sobic.001G204000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18590766-18595765 Sorghum bicolor
Sobic.001G204000 10.0kb upstream 10.0kb upstream 13074 true Chr01: 18595766-18608839 Sorghum bicolor
Sobic.001G204000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18598840-18608839 Sorghum bicolor
Sobic.001G204000 10.0kb downstream 10.0kb downstream 13074 true Chr01: 18585766-18598839 Sorghum bicolor
Sobic.001G204000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18585766-18595765 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182702 5267 Panicoideae View MSA
124582382 5269 Grass View MSA
122046877 5273 Angiosperm View MSA
121344318 5274 Embryophyte View MSA
123380022 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.04       Low
cufflinks 44.132     High High
cufflinks 16.373     High  
cufflinks 14.532     High  
cufflinks 13.478     High  
cufflinks 25.648     High  
cufflinks 50.442     High High
cufflinks 33.151     High  
cufflinks 24.422     High  
cufflinks 22.103     High  
cufflinks 24.035     High  
cufflinks 26.098     High  
cufflinks 22.16     High  
cufflinks 18.664     High  
cufflinks 21.77     High  
cufflinks 28.643     High  
cufflinks 49.509     High High
cufflinks 38.154     High High
cufflinks 17.02     High  
cufflinks 20.557     High  
cufflinks 21.527     High  
cufflinks 14.032     High  
cufflinks 26.174     High  
cufflinks 24.158     High  
cufflinks 57.947     High High
cufflinks 35.895     High High
cufflinks 15.961     High  
cufflinks 9.179       Low
cufflinks 20.807     High  
cufflinks 20.791     High  

0 Strain