Gene : Sobic.001G199300 S. bicolor v3.1.1
Defline:  (1 of 8) PF04859 - Plant protein of unknown function (DUF641) (DUF641) Genomic Order:  2068
Name:  ? Sobic.001G199300 Secondary Identifier:  ? PAC:37941121
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G199300 0.5kb upstream 0.5kb upstream 1919 true Chr01: 18042973-18044891 Sorghum bicolor
Sobic.001G199300 0.5kb upstream 0.5kb upstream 500 false Chr01: 18044392-18044891 Sorghum bicolor
Sobic.001G199300 0.5kb downstream 0.5kb downstream 1919 true Chr01: 18042473-18044391 Sorghum bicolor
Sobic.001G199300 0.5kb downstream 0.5kb downstream 500 false Chr01: 18042473-18042972 Sorghum bicolor
Sobic.001G199300 1.0kb upstream 1.0kb upstream 2419 true Chr01: 18042973-18045391 Sorghum bicolor
Sobic.001G199300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18044392-18045391 Sorghum bicolor
Sobic.001G199300 1.0kb downstream 1.0kb downstream 2419 true Chr01: 18041973-18044391 Sorghum bicolor
Sobic.001G199300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18041973-18042972 Sorghum bicolor
Sobic.001G199300 2.0kb upstream 2.0kb upstream 3419 true Chr01: 18042973-18046391 Sorghum bicolor
Sobic.001G199300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18044392-18046391 Sorghum bicolor
Sobic.001G199300 2.0kb downstream 2.0kb downstream 3419 true Chr01: 18040973-18044391 Sorghum bicolor
Sobic.001G199300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18040973-18042972 Sorghum bicolor
Sobic.001G199300 5.0kb upstream 5.0kb upstream 6419 true Chr01: 18042973-18049391 Sorghum bicolor
Sobic.001G199300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18044392-18049391 Sorghum bicolor
Sobic.001G199300 5.0kb downstream 5.0kb downstream 6419 true Chr01: 18037973-18044391 Sorghum bicolor
Sobic.001G199300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18037973-18042972 Sorghum bicolor
Sobic.001G199300 10.0kb upstream 10.0kb upstream 11419 true Chr01: 18042973-18054391 Sorghum bicolor
Sobic.001G199300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18044392-18054391 Sorghum bicolor
Sobic.001G199300 10.0kb downstream 10.0kb downstream 11419 true Chr01: 18032973-18044391 Sorghum bicolor
Sobic.001G199300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18032973-18042972 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041512 5273 Angiosperm View MSA
122175394 5267 Panicoideae View MSA
124578627 5269 Grass View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.547        
cufflinks 3.639       Low
cufflinks 2.166       Low
cufflinks 3.904        
cufflinks 4.765        
cufflinks 6.58        
cufflinks 9.412        
cufflinks 7.386        
cufflinks 4.303        
cufflinks 2.477       Low
cufflinks 5.876        
cufflinks 13.541     High High
cufflinks 3.995        
cufflinks 18.452     High High
cufflinks 6.466        
cufflinks 5.208        
cufflinks 10.593        
cufflinks 10.064        
cufflinks 7.953        
cufflinks 11.744       High
cufflinks 5.335        
cufflinks 10.207        
cufflinks 12.772     High High
cufflinks 12.063     High High
cufflinks 3.747       Low
cufflinks 3.431       Low
cufflinks 4.028        
cufflinks 7.286        
cufflinks 15.613     High High
cufflinks 8.369        

0 Strain