Gene : Sobic.001G197000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10108//PTHR10108:SF753 - METHYLTRANSFERASE // METHYLTRANSFERASE PMT17-RELATED Genomic Order:  2044
Name:  ? Sobic.001G197000 Secondary Identifier:  ? PAC:37938107
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G197000 0.5kb upstream 0.5kb upstream 5060 true Chr01: 17801601-17806660 Sorghum bicolor
Sobic.001G197000 0.5kb upstream 0.5kb upstream 500 false Chr01: 17806161-17806660 Sorghum bicolor
Sobic.001G197000 0.5kb downstream 0.5kb downstream 5060 true Chr01: 17801101-17806160 Sorghum bicolor
Sobic.001G197000 0.5kb downstream 0.5kb downstream 500 false Chr01: 17801101-17801600 Sorghum bicolor
Sobic.001G197000 1.0kb upstream 1.0kb upstream 5560 true Chr01: 17801601-17807160 Sorghum bicolor
Sobic.001G197000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17806161-17807160 Sorghum bicolor
Sobic.001G197000 1.0kb downstream 1.0kb downstream 5560 true Chr01: 17800601-17806160 Sorghum bicolor
Sobic.001G197000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17800601-17801600 Sorghum bicolor
Sobic.001G197000 2.0kb upstream 2.0kb upstream 6560 true Chr01: 17801601-17808160 Sorghum bicolor
Sobic.001G197000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17806161-17808160 Sorghum bicolor
Sobic.001G197000 2.0kb downstream 2.0kb downstream 6560 true Chr01: 17799601-17806160 Sorghum bicolor
Sobic.001G197000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17799601-17801600 Sorghum bicolor
Sobic.001G197000 5.0kb upstream 5.0kb upstream 9560 true Chr01: 17801601-17811160 Sorghum bicolor
Sobic.001G197000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17806161-17811160 Sorghum bicolor
Sobic.001G197000 5.0kb downstream 5.0kb downstream 9560 true Chr01: 17796601-17806160 Sorghum bicolor
Sobic.001G197000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17796601-17801600 Sorghum bicolor
Sobic.001G197000 10.0kb upstream 10.0kb upstream 14560 true Chr01: 17801601-17816160 Sorghum bicolor
Sobic.001G197000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17806161-17816160 Sorghum bicolor
Sobic.001G197000 10.0kb downstream 10.0kb downstream 14560 true Chr01: 17791601-17806160 Sorghum bicolor
Sobic.001G197000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17791601-17801600 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192386 5267 Panicoideae View MSA
124580771 5269 Grass View MSA
122046035 5273 Angiosperm View MSA
121348774 5274 Embryophyte View MSA
123381009 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.788     High  
cufflinks 2.642       Low
cufflinks 5.208       Low
cufflinks 8.214        
cufflinks 90.79     High High
cufflinks 4.436       Low
cufflinks 18.838     High  
cufflinks 12.515     High  
cufflinks 27.681     High  
cufflinks 28.411     High  
cufflinks 38.406     High  
cufflinks 20.989     High  
cufflinks 24.399     High  
cufflinks 27.821     High  
cufflinks 24.431     High  
cufflinks 2.527       Low
cufflinks 21.125     High  
cufflinks 17.342     High  
cufflinks 18.807     High  
cufflinks 24.804     High  
cufflinks 32.694     High  
cufflinks 22.745     High  
cufflinks 24.777     High  
cufflinks 23.79     High  
cufflinks 2.618       Low
cufflinks 4.048       Low
cufflinks 36.036     High  
cufflinks 4.266       Low
cufflinks 24.756     High  
cufflinks 15.953     High  

0 Strain