Gene : Sobic.001G198100 S. bicolor v3.1.1
Defline:  (1 of 10) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  2056
Name:  ? Sobic.001G198100 Secondary Identifier:  ? PAC:37940644
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G198100 0.5kb upstream 0.5kb upstream 5042 true Chr01: 17900064-17905105 Sorghum bicolor
Sobic.001G198100 0.5kb upstream 0.5kb upstream 500 false Chr01: 17904606-17905105 Sorghum bicolor
Sobic.001G198100 0.5kb downstream 0.5kb downstream 5042 true Chr01: 17899564-17904605 Sorghum bicolor
Sobic.001G198100 0.5kb downstream 0.5kb downstream 500 false Chr01: 17899564-17900063 Sorghum bicolor
Sobic.001G198100 1.0kb upstream 1.0kb upstream 5542 true Chr01: 17900064-17905605 Sorghum bicolor
Sobic.001G198100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17904606-17905605 Sorghum bicolor
Sobic.001G198100 1.0kb downstream 1.0kb downstream 5542 true Chr01: 17899064-17904605 Sorghum bicolor
Sobic.001G198100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17899064-17900063 Sorghum bicolor
Sobic.001G198100 2.0kb upstream 2.0kb upstream 6542 true Chr01: 17900064-17906605 Sorghum bicolor
Sobic.001G198100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17904606-17906605 Sorghum bicolor
Sobic.001G198100 2.0kb downstream 2.0kb downstream 6542 true Chr01: 17898064-17904605 Sorghum bicolor
Sobic.001G198100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17898064-17900063 Sorghum bicolor
Sobic.001G198100 5.0kb upstream 5.0kb upstream 9542 true Chr01: 17900064-17909605 Sorghum bicolor
Sobic.001G198100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17904606-17909605 Sorghum bicolor
Sobic.001G198100 5.0kb downstream 5.0kb downstream 9542 true Chr01: 17895064-17904605 Sorghum bicolor
Sobic.001G198100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17895064-17900063 Sorghum bicolor
Sobic.001G198100 10.0kb upstream 10.0kb upstream 14542 true Chr01: 17900064-17914605 Sorghum bicolor
Sobic.001G198100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17904606-17914605 Sorghum bicolor
Sobic.001G198100 10.0kb downstream 10.0kb downstream 14542 true Chr01: 17890064-17904605 Sorghum bicolor
Sobic.001G198100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17890064-17900063 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183171 5267 Panicoideae View MSA
124581203 5269 Grass View MSA
122048441 5273 Angiosperm View MSA
121348258 5274 Embryophyte View MSA
123425771 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.323       Low
cufflinks 7.094     High High
cufflinks 13.384     High High
cufflinks 7.619       High
cufflinks 3.237        
cufflinks 8.686       High
cufflinks 4.168        
cufflinks 4.955        
cufflinks 3.316        
cufflinks 3.468        
cufflinks 1.861        
cufflinks 1.993        
cufflinks 6.216        
cufflinks 1.224       Low
cufflinks 5.268        
cufflinks 8.151       High
cufflinks 4.0        
cufflinks 4.316        
cufflinks 6.268        
cufflinks 3.256        
cufflinks 4.858        
cufflinks 1.346       Low
cufflinks 1.547       Low
cufflinks 1.436       Low
cufflinks 7.211       High
cufflinks 5.172        
cufflinks 2.427        
cufflinks 2.521        
cufflinks 5.308        
cufflinks 4.045        

0 Strain