Gene : Sobic.001G191000 S. bicolor v3.1.1
Defline:  (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) Genomic Order:  1980
Name:  ? Sobic.001G191000 Secondary Identifier:  ? PAC:37938464
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G191000 0.5kb upstream 0.5kb upstream 3584 true Chr01: 16931779-16935362 Sorghum bicolor
Sobic.001G191000 0.5kb upstream 0.5kb upstream 500 false Chr01: 16934863-16935362 Sorghum bicolor
Sobic.001G191000 0.5kb downstream 0.5kb downstream 3584 true Chr01: 16931279-16934862 Sorghum bicolor
Sobic.001G191000 0.5kb downstream 0.5kb downstream 500 false Chr01: 16931279-16931778 Sorghum bicolor
Sobic.001G191000 1.0kb upstream 1.0kb upstream 4084 true Chr01: 16931779-16935862 Sorghum bicolor
Sobic.001G191000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 16934863-16935862 Sorghum bicolor
Sobic.001G191000 1.0kb downstream 1.0kb downstream 4084 true Chr01: 16930779-16934862 Sorghum bicolor
Sobic.001G191000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 16930779-16931778 Sorghum bicolor
Sobic.001G191000 2.0kb upstream 2.0kb upstream 5084 true Chr01: 16931779-16936862 Sorghum bicolor
Sobic.001G191000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 16934863-16936862 Sorghum bicolor
Sobic.001G191000 2.0kb downstream 2.0kb downstream 5084 true Chr01: 16929779-16934862 Sorghum bicolor
Sobic.001G191000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 16929779-16931778 Sorghum bicolor
Sobic.001G191000 5.0kb upstream 5.0kb upstream 8084 true Chr01: 16931779-16939862 Sorghum bicolor
Sobic.001G191000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 16934863-16939862 Sorghum bicolor
Sobic.001G191000 5.0kb downstream 5.0kb downstream 8084 true Chr01: 16926779-16934862 Sorghum bicolor
Sobic.001G191000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 16926779-16931778 Sorghum bicolor
Sobic.001G191000 10.0kb upstream 10.0kb upstream 13084 true Chr01: 16931779-16944862 Sorghum bicolor
Sobic.001G191000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 16934863-16944862 Sorghum bicolor
Sobic.001G191000 10.0kb downstream 10.0kb downstream 13084 true Chr01: 16921779-16934862 Sorghum bicolor
Sobic.001G191000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 16921779-16931778 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181842 5267 Panicoideae View MSA
124584132 5269 Grass View MSA
122046027 5273 Angiosperm View MSA
121345659 5274 Embryophyte View MSA
123426333 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.857        
cufflinks 17.278     High  
cufflinks 17.828     High  
cufflinks 7.62        
cufflinks 4.199        
cufflinks 7.941        
cufflinks 33.894     High High
cufflinks 60.307     High High
cufflinks 2.208        
cufflinks 1.95        
cufflinks 1.287       Low
cufflinks 1.3       Low
cufflinks 1.366        
cufflinks 1.482        
cufflinks 4.875        
cufflinks 13.69     High  
cufflinks 30.604     High High
cufflinks 37.824     High High
cufflinks 24.997     High High
cufflinks 9.445        
cufflinks 3.27        
cufflinks 1.421        
cufflinks 1.145       Low
cufflinks 1.284       Low
cufflinks 4.194        
cufflinks 14.055     High  
cufflinks 1.287       Low
cufflinks 2.688        
cufflinks 93.147     High High
cufflinks 5.146        

0 Strain