Gene : Sobic.001G192900 S. bicolor v3.1.1
Defline:  (1 of 1) K10849 - DNA excision repair protein ERCC-1 (ERCC1) Genomic Order:  2000
Name:  ? Sobic.001G192900 Secondary Identifier:  ? PAC:37939900
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G192900 0.5kb upstream 0.5kb upstream 3440 true Chr01: 17140848-17144287 Sorghum bicolor
Sobic.001G192900 0.5kb upstream 0.5kb upstream 500 false Chr01: 17140848-17141347 Sorghum bicolor
Sobic.001G192900 0.5kb downstream 0.5kb downstream 3440 true Chr01: 17141348-17144787 Sorghum bicolor
Sobic.001G192900 0.5kb downstream 0.5kb downstream 500 false Chr01: 17144288-17144787 Sorghum bicolor
Sobic.001G192900 1.0kb upstream 1.0kb upstream 3940 true Chr01: 17140348-17144287 Sorghum bicolor
Sobic.001G192900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17140348-17141347 Sorghum bicolor
Sobic.001G192900 1.0kb downstream 1.0kb downstream 3940 true Chr01: 17141348-17145287 Sorghum bicolor
Sobic.001G192900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17144288-17145287 Sorghum bicolor
Sobic.001G192900 2.0kb upstream 2.0kb upstream 4940 true Chr01: 17139348-17144287 Sorghum bicolor
Sobic.001G192900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17139348-17141347 Sorghum bicolor
Sobic.001G192900 2.0kb downstream 2.0kb downstream 4940 true Chr01: 17141348-17146287 Sorghum bicolor
Sobic.001G192900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17144288-17146287 Sorghum bicolor
Sobic.001G192900 5.0kb upstream 5.0kb upstream 7940 true Chr01: 17136348-17144287 Sorghum bicolor
Sobic.001G192900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17136348-17141347 Sorghum bicolor
Sobic.001G192900 5.0kb downstream 5.0kb downstream 7940 true Chr01: 17141348-17149287 Sorghum bicolor
Sobic.001G192900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17144288-17149287 Sorghum bicolor
Sobic.001G192900 10.0kb upstream 10.0kb upstream 12940 true Chr01: 17131348-17144287 Sorghum bicolor
Sobic.001G192900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17131348-17141347 Sorghum bicolor
Sobic.001G192900 10.0kb downstream 10.0kb downstream 12940 true Chr01: 17141348-17154287 Sorghum bicolor
Sobic.001G192900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17144288-17154287 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176634 5267 Panicoideae View MSA
124580344 5269 Grass View MSA
122045728 5273 Angiosperm View MSA
121344888 5274 Embryophyte View MSA
123427474 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.356        
cufflinks 0.658       Low
cufflinks 1.927        
cufflinks 5.506       High
cufflinks 2.181        
cufflinks 7.548       High
cufflinks 2.175        
cufflinks 1.562        
cufflinks 5.112       High
cufflinks 4.819       High
cufflinks 2.657        
cufflinks 3.828        
cufflinks 2.336        
cufflinks 3.055        
cufflinks 3.099        
cufflinks 1.78        
cufflinks 1.701        
cufflinks 2.02        
cufflinks 2.595        
cufflinks 2.534        
cufflinks 3.308        
cufflinks 2.561        
cufflinks 2.34        
cufflinks 2.43        
cufflinks 1.803        
cufflinks 0.725       Low
cufflinks 3.21        
cufflinks 9.497       High
cufflinks 1.596        
cufflinks 3.918        

0 Strain