Gene : Sobic.001G192000 S. bicolor v3.1.1
Defline:  (1 of 2) K17907 - autophagy-related protein 9 (ATG9) Genomic Order:  1990
Name:  ? Sobic.001G192000 Secondary Identifier:  ? PAC:37942532
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G192000 0.5kb upstream 0.5kb upstream 7457 true Chr01: 17038290-17045746 Sorghum bicolor
Sobic.001G192000 0.5kb upstream 0.5kb upstream 500 false Chr01: 17045247-17045746 Sorghum bicolor
Sobic.001G192000 0.5kb downstream 0.5kb downstream 7457 true Chr01: 17037790-17045246 Sorghum bicolor
Sobic.001G192000 0.5kb downstream 0.5kb downstream 500 false Chr01: 17037790-17038289 Sorghum bicolor
Sobic.001G192000 1.0kb upstream 1.0kb upstream 7957 true Chr01: 17038290-17046246 Sorghum bicolor
Sobic.001G192000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17045247-17046246 Sorghum bicolor
Sobic.001G192000 1.0kb downstream 1.0kb downstream 7957 true Chr01: 17037290-17045246 Sorghum bicolor
Sobic.001G192000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17037290-17038289 Sorghum bicolor
Sobic.001G192000 2.0kb upstream 2.0kb upstream 8957 true Chr01: 17038290-17047246 Sorghum bicolor
Sobic.001G192000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17045247-17047246 Sorghum bicolor
Sobic.001G192000 2.0kb downstream 2.0kb downstream 8957 true Chr01: 17036290-17045246 Sorghum bicolor
Sobic.001G192000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17036290-17038289 Sorghum bicolor
Sobic.001G192000 5.0kb upstream 5.0kb upstream 11957 true Chr01: 17038290-17050246 Sorghum bicolor
Sobic.001G192000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17045247-17050246 Sorghum bicolor
Sobic.001G192000 5.0kb downstream 5.0kb downstream 11957 true Chr01: 17033290-17045246 Sorghum bicolor
Sobic.001G192000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17033290-17038289 Sorghum bicolor
Sobic.001G192000 10.0kb upstream 10.0kb upstream 16957 true Chr01: 17038290-17055246 Sorghum bicolor
Sobic.001G192000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17045247-17055246 Sorghum bicolor
Sobic.001G192000 10.0kb downstream 10.0kb downstream 16957 true Chr01: 17028290-17045246 Sorghum bicolor
Sobic.001G192000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17028290-17038289 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185097 5267 Panicoideae View MSA
124579747 5269 Grass View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.324        
cufflinks 2.446       Low
cufflinks 3.529        
cufflinks 3.318        
cufflinks 6.316       High
cufflinks 3.053        
cufflinks 4.617        
cufflinks 2.867        
cufflinks 4.417        
cufflinks 5.046        
cufflinks 4.065        
cufflinks 5.976       High
cufflinks 5.025        
cufflinks 4.734        
cufflinks 5.36        
cufflinks 3.467        
cufflinks 4.8        
cufflinks 4.92        
cufflinks 3.99        
cufflinks 5.49        
cufflinks 5.634       High
cufflinks 3.555        
cufflinks 5.343        
cufflinks 4.627        
cufflinks 3.38        
cufflinks 2.382       Low
cufflinks 3.814        
cufflinks 2.617       Low
cufflinks 3.807        
cufflinks 5.342        

0 Strain