Gene : Sobic.001G192600 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR15371//PTHR15371:SF6 - TIM23 // SUBFAMILY NOT NAMED Genomic Order:  1996
Name:  ? Sobic.001G192600 Secondary Identifier:  ? PAC:37939085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G192600 0.5kb upstream 0.5kb upstream 1797 true Chr01: 17115367-17117163 Sorghum bicolor
Sobic.001G192600 0.5kb upstream 0.5kb upstream 500 false Chr01: 17115367-17115866 Sorghum bicolor
Sobic.001G192600 0.5kb downstream 0.5kb downstream 1797 true Chr01: 17115867-17117663 Sorghum bicolor
Sobic.001G192600 0.5kb downstream 0.5kb downstream 500 false Chr01: 17117164-17117663 Sorghum bicolor
Sobic.001G192600 1.0kb upstream 1.0kb upstream 2297 true Chr01: 17114867-17117163 Sorghum bicolor
Sobic.001G192600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17114867-17115866 Sorghum bicolor
Sobic.001G192600 1.0kb downstream 1.0kb downstream 2297 true Chr01: 17115867-17118163 Sorghum bicolor
Sobic.001G192600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17117164-17118163 Sorghum bicolor
Sobic.001G192600 2.0kb upstream 2.0kb upstream 3297 true Chr01: 17113867-17117163 Sorghum bicolor
Sobic.001G192600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17113867-17115866 Sorghum bicolor
Sobic.001G192600 2.0kb downstream 2.0kb downstream 3297 true Chr01: 17115867-17119163 Sorghum bicolor
Sobic.001G192600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17117164-17119163 Sorghum bicolor
Sobic.001G192600 5.0kb upstream 5.0kb upstream 6297 true Chr01: 17110867-17117163 Sorghum bicolor
Sobic.001G192600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17110867-17115866 Sorghum bicolor
Sobic.001G192600 5.0kb downstream 5.0kb downstream 6297 true Chr01: 17115867-17122163 Sorghum bicolor
Sobic.001G192600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17117164-17122163 Sorghum bicolor
Sobic.001G192600 10.0kb upstream 10.0kb upstream 11297 true Chr01: 17105867-17117163 Sorghum bicolor
Sobic.001G192600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17105867-17115866 Sorghum bicolor
Sobic.001G192600 10.0kb downstream 10.0kb downstream 11297 true Chr01: 17115867-17127163 Sorghum bicolor
Sobic.001G192600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17117164-17127163 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177167 5267 Panicoideae View MSA
124569489 5269 Grass View MSA
122045727 5273 Angiosperm View MSA
121349022 5274 Embryophyte View MSA
123425450 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.885       High
cufflinks 0.442       Low
cufflinks 2.831        
cufflinks 5.978       High
cufflinks 4.135        
cufflinks 3.247        
cufflinks 1.098        
cufflinks 0.581       Low
cufflinks 1.991        
cufflinks 2.155        
cufflinks 3.978        
cufflinks 1.881        
cufflinks 3.279        
cufflinks 3.059        
cufflinks 2.366        
cufflinks 0.982       Low
cufflinks 0.941       Low
cufflinks 0.7       Low
cufflinks 5.219       High
cufflinks 1.27        
cufflinks 2.384        
cufflinks 3.238        
cufflinks 2.01        
cufflinks 2.017        
cufflinks 1.348        
cufflinks 0.514       Low
cufflinks 2.478        
cufflinks 17.064     High High
cufflinks 0.659       Low
cufflinks 3.771        

0 Strain