Gene : Sobic.003G433300 S. bicolor v3.1.1
Defline:  (1 of 1) K08734 - DNA mismatch repair protein MLH1 (MLH1) Genomic Order:  4550
Name:  ? Sobic.003G433300 Secondary Identifier:  ? PAC:37915418
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G433300 0.5kb upstream 0.5kb upstream 7427 true Chr03: 73528142-73535568 Sorghum bicolor
Sobic.003G433300 0.5kb upstream 0.5kb upstream 500 false Chr03: 73528142-73528641 Sorghum bicolor
Sobic.003G433300 0.5kb downstream 0.5kb downstream 7427 true Chr03: 73528642-73536068 Sorghum bicolor
Sobic.003G433300 0.5kb downstream 0.5kb downstream 500 false Chr03: 73535569-73536068 Sorghum bicolor
Sobic.003G433300 1.0kb upstream 1.0kb upstream 7927 true Chr03: 73527642-73535568 Sorghum bicolor
Sobic.003G433300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 73527642-73528641 Sorghum bicolor
Sobic.003G433300 1.0kb downstream 1.0kb downstream 7927 true Chr03: 73528642-73536568 Sorghum bicolor
Sobic.003G433300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 73535569-73536568 Sorghum bicolor
Sobic.003G433300 2.0kb upstream 2.0kb upstream 8927 true Chr03: 73526642-73535568 Sorghum bicolor
Sobic.003G433300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 73526642-73528641 Sorghum bicolor
Sobic.003G433300 2.0kb downstream 2.0kb downstream 8927 true Chr03: 73528642-73537568 Sorghum bicolor
Sobic.003G433300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 73535569-73537568 Sorghum bicolor
Sobic.003G433300 5.0kb upstream 5.0kb upstream 11927 true Chr03: 73523642-73535568 Sorghum bicolor
Sobic.003G433300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 73523642-73528641 Sorghum bicolor
Sobic.003G433300 5.0kb downstream 5.0kb downstream 11927 true Chr03: 73528642-73540568 Sorghum bicolor
Sobic.003G433300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 73535569-73540568 Sorghum bicolor
Sobic.003G433300 10.0kb upstream 10.0kb upstream 16927 true Chr03: 73518642-73535568 Sorghum bicolor
Sobic.003G433300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 73518642-73528641 Sorghum bicolor
Sobic.003G433300 10.0kb downstream 10.0kb downstream 16927 true Chr03: 73528642-73545568 Sorghum bicolor
Sobic.003G433300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 73535569-73545568 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196805 5267 Panicoideae View MSA
124570850 5269 Grass View MSA
122045945 5273 Angiosperm View MSA
121345216 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.81        
cufflinks 0.202       Low
cufflinks 1.18        
cufflinks 1.853        
cufflinks 1.473        
cufflinks 0.947        
cufflinks 1.384        
cufflinks 0.22       Low
cufflinks 2.431       High
cufflinks 2.213       High
cufflinks 0.975        
cufflinks 1.516        
cufflinks 1.263        
cufflinks 0.746        
cufflinks 0.871        
cufflinks 0.6        
cufflinks 1.325        
cufflinks 1.614        
cufflinks 0.529        
cufflinks 1.402        
cufflinks 3.182       High
cufflinks 0.968        
cufflinks 1.194        
cufflinks 1.079        
cufflinks 0.383       Low
cufflinks 0.112       Low
cufflinks 1.615        
cufflinks 0.61        
cufflinks 0.659        
cufflinks 1.194        

0 Strain