Gene : Sobic.001G183600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11214:SF5 - BETA-1,3-GALACTOSYLTRANSFERASE 2-RELATED Genomic Order:  1906
Name:  ? Sobic.001G183600 Secondary Identifier:  ? PAC:37937449
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G183600 0.5kb upstream 0.5kb upstream 5370 true Chr01: 15635992-15641361 Sorghum bicolor
Sobic.001G183600 0.5kb upstream 0.5kb upstream 500 false Chr01: 15635992-15636491 Sorghum bicolor
Sobic.001G183600 0.5kb downstream 0.5kb downstream 5370 true Chr01: 15636492-15641861 Sorghum bicolor
Sobic.001G183600 0.5kb downstream 0.5kb downstream 500 false Chr01: 15641362-15641861 Sorghum bicolor
Sobic.001G183600 1.0kb upstream 1.0kb upstream 5870 true Chr01: 15635492-15641361 Sorghum bicolor
Sobic.001G183600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15635492-15636491 Sorghum bicolor
Sobic.001G183600 1.0kb downstream 1.0kb downstream 5870 true Chr01: 15636492-15642361 Sorghum bicolor
Sobic.001G183600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15641362-15642361 Sorghum bicolor
Sobic.001G183600 2.0kb upstream 2.0kb upstream 6870 true Chr01: 15634492-15641361 Sorghum bicolor
Sobic.001G183600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15634492-15636491 Sorghum bicolor
Sobic.001G183600 2.0kb downstream 2.0kb downstream 6870 true Chr01: 15636492-15643361 Sorghum bicolor
Sobic.001G183600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15641362-15643361 Sorghum bicolor
Sobic.001G183600 5.0kb upstream 5.0kb upstream 9870 true Chr01: 15631492-15641361 Sorghum bicolor
Sobic.001G183600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15631492-15636491 Sorghum bicolor
Sobic.001G183600 5.0kb downstream 5.0kb downstream 9870 true Chr01: 15636492-15646361 Sorghum bicolor
Sobic.001G183600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15641362-15646361 Sorghum bicolor
Sobic.001G183600 10.0kb upstream 10.0kb upstream 14870 true Chr01: 15626492-15641361 Sorghum bicolor
Sobic.001G183600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15626492-15636491 Sorghum bicolor
Sobic.001G183600 10.0kb downstream 10.0kb downstream 14870 true Chr01: 15636492-15651361 Sorghum bicolor
Sobic.001G183600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15641362-15651361 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189539 5267 Panicoideae View MSA
124575692 5269 Grass View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.075       Low
cufflinks 0.794       Low
cufflinks 1.447       Low
cufflinks 3.127        
cufflinks 5.861        
cufflinks 3.529        
cufflinks 8.017        
cufflinks 7.023        
cufflinks 10.196        
cufflinks 13.263     High  
cufflinks 16.332     High  
cufflinks 20.189     High High
cufflinks 19.541     High High
cufflinks 17.65     High High
cufflinks 11.698        
cufflinks 1.25       Low
cufflinks 8.267        
cufflinks 8.191        
cufflinks 3.184        
cufflinks 10.975        
cufflinks 1.067       Low
cufflinks 15.389     High  
cufflinks 21.76     High High
cufflinks 21.493     High High
cufflinks 1.462       Low
cufflinks 1.428       Low
cufflinks 5.18        
cufflinks 2.072       Low
cufflinks 11.871     High  
cufflinks 7.231        

0 Strain