Gene : Sobic.001G182100 S. bicolor v3.1.1
Defline:  (1 of 11) PF04484 - Family of unknown function (DUF566) (DUF566) Genomic Order:  1889
Name:  ? Sobic.001G182100 Secondary Identifier:  ? PAC:37943569
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G182100 0.5kb upstream 0.5kb upstream 4170 true Chr01: 15413396-15417565 Sorghum bicolor
Sobic.001G182100 0.5kb upstream 0.5kb upstream 500 false Chr01: 15417066-15417565 Sorghum bicolor
Sobic.001G182100 0.5kb downstream 0.5kb downstream 4170 true Chr01: 15412896-15417065 Sorghum bicolor
Sobic.001G182100 0.5kb downstream 0.5kb downstream 500 false Chr01: 15412896-15413395 Sorghum bicolor
Sobic.001G182100 1.0kb upstream 1.0kb upstream 4670 true Chr01: 15413396-15418065 Sorghum bicolor
Sobic.001G182100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15417066-15418065 Sorghum bicolor
Sobic.001G182100 1.0kb downstream 1.0kb downstream 4670 true Chr01: 15412396-15417065 Sorghum bicolor
Sobic.001G182100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15412396-15413395 Sorghum bicolor
Sobic.001G182100 2.0kb upstream 2.0kb upstream 5670 true Chr01: 15413396-15419065 Sorghum bicolor
Sobic.001G182100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15417066-15419065 Sorghum bicolor
Sobic.001G182100 2.0kb downstream 2.0kb downstream 5670 true Chr01: 15411396-15417065 Sorghum bicolor
Sobic.001G182100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15411396-15413395 Sorghum bicolor
Sobic.001G182100 5.0kb upstream 5.0kb upstream 8670 true Chr01: 15413396-15422065 Sorghum bicolor
Sobic.001G182100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15417066-15422065 Sorghum bicolor
Sobic.001G182100 5.0kb downstream 5.0kb downstream 8670 true Chr01: 15408396-15417065 Sorghum bicolor
Sobic.001G182100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15408396-15413395 Sorghum bicolor
Sobic.001G182100 10.0kb upstream 10.0kb upstream 13670 true Chr01: 15413396-15427065 Sorghum bicolor
Sobic.001G182100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15417066-15427065 Sorghum bicolor
Sobic.001G182100 10.0kb downstream 10.0kb downstream 13670 true Chr01: 15403396-15417065 Sorghum bicolor
Sobic.001G182100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15403396-15413395 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026460 5273 Angiosperm View MSA
122185308 5267 Panicoideae View MSA
124578863 5269 Grass View MSA
121296342 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061        
cufflinks 0.132        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.08     Low  
cufflinks 0.354        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.124        
cufflinks 0.005     Low Low
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.378        
cufflinks 0.494       High
cufflinks 0.103        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.152       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low

0 Strain