Gene : Sobic.001G183100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10641:SF532 - MYB DOMAIN PROTEIN 120-RELATED Genomic Order:  1900
Name:  ? Sobic.001G183100 Secondary Identifier:  ? PAC:37938688
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G183100 0.5kb upstream 0.5kb upstream 3826 true Chr01: 15517031-15520856 Sorghum bicolor
Sobic.001G183100 0.5kb upstream 0.5kb upstream 500 false Chr01: 15520357-15520856 Sorghum bicolor
Sobic.001G183100 0.5kb downstream 0.5kb downstream 3826 true Chr01: 15516531-15520356 Sorghum bicolor
Sobic.001G183100 0.5kb downstream 0.5kb downstream 500 false Chr01: 15516531-15517030 Sorghum bicolor
Sobic.001G183100 1.0kb upstream 1.0kb upstream 4326 true Chr01: 15517031-15521356 Sorghum bicolor
Sobic.001G183100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15520357-15521356 Sorghum bicolor
Sobic.001G183100 1.0kb downstream 1.0kb downstream 4326 true Chr01: 15516031-15520356 Sorghum bicolor
Sobic.001G183100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15516031-15517030 Sorghum bicolor
Sobic.001G183100 2.0kb upstream 2.0kb upstream 5326 true Chr01: 15517031-15522356 Sorghum bicolor
Sobic.001G183100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15520357-15522356 Sorghum bicolor
Sobic.001G183100 2.0kb downstream 2.0kb downstream 5326 true Chr01: 15515031-15520356 Sorghum bicolor
Sobic.001G183100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15515031-15517030 Sorghum bicolor
Sobic.001G183100 5.0kb upstream 5.0kb upstream 8326 true Chr01: 15517031-15525356 Sorghum bicolor
Sobic.001G183100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15520357-15525356 Sorghum bicolor
Sobic.001G183100 5.0kb downstream 5.0kb downstream 8326 true Chr01: 15512031-15520356 Sorghum bicolor
Sobic.001G183100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15512031-15517030 Sorghum bicolor
Sobic.001G183100 10.0kb upstream 10.0kb upstream 13326 true Chr01: 15517031-15530356 Sorghum bicolor
Sobic.001G183100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15520357-15530356 Sorghum bicolor
Sobic.001G183100 10.0kb downstream 10.0kb downstream 13326 true Chr01: 15507031-15520356 Sorghum bicolor
Sobic.001G183100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15507031-15517030 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184282 5267 Panicoideae View MSA
124569184 5269 Grass View MSA
122048275 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.371       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.039     Low  
cufflinks 0.011     Low  
cufflinks 0.018     Low  
cufflinks 0.01     Low  
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.029     Low  
cufflinks 0.026     Low  
cufflinks 0.066     Low  
cufflinks 0.09     Low High
cufflinks 0.01     Low  
cufflinks 0.021     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.013     Low  
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.914       High
cufflinks 0.01     Low  
cufflinks 0.806       High

0 Strain